RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 CUL1Q13616 776 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 ZNF77Q15935 545 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 CCNYQ8ND76 341 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 DEPDC1BQ8WUY9 529 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 IFT81Q8WYA0 676 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 P2RY11Q96G91 374 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 FAM114A2Q9NRY5 505 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 DFFAO00273 331 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 SOX1O00570 391 aaPredicted RBP20.78■□□□□ 0.92
CPNE9-205ENST00000613455 TP73O15350 636 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 TSPAN3O60637 253 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 HOXB8P17481 243 aaPredicted RBP20.78■□□□□ 0.92
CPNE9-205ENST00000613455 FSHRP23945 695 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 MAPKAPK2P49137 400 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 DLX2Q07687 328 aaPredicted RBP20.78■□□□□ 0.92
CPNE9-205ENST00000613455 AP1B1Q10567 949 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 CTC1Q2NKJ3 1217 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 HEATR6Q6AI08 1181 aaKnown RBP20.78■□□□□ 0.92
CPNE9-205ENST00000613455 ARHGAP36Q6ZRI8 547 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 ARID3BQ8IVW6 561 aaPredicted RBP20.78■□□□□ 0.92
CPNE9-205ENST00000613455 NPAS3Q8IXF0 933 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 CCHCR1Q8TD31 782 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 HTR3CQ8WXA8 447 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 BRD8Q9H0E9 1235 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 NEUROG2Q9H2A3 272 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 RETREG1Q9H6L5 497 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 DONSONQ9NYP3 566 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 NFU1Q9UMS0 254 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 E2F8A0AVK6 867 aa20.77■□□□□ 0.92
CPNE9-205ENST00000613455 CCDC151A5D8V7 595 aa20.77■□□□□ 0.92
CPNE9-205ENST00000613455 TCF3P15923 654 aa20.77■□□□□ 0.92
CPNE9-205ENST00000613455 POU3F3P20264 500 aaPredicted RBP20.77■□□□□ 0.92
CPNE9-205ENST00000613455 RPL22P35268 128 aaKnown RBP20.77■□□□□ 0.92
CPNE9-205ENST00000613455 NDST2P52849 883 aa20.77■□□□□ 0.92
CPNE9-205ENST00000613455 CDH4P55283 916 aa20.77■□□□□ 0.92
CPNE9-205ENST00000613455 BRD3Q15059 726 aa20.77■□□□□ 0.92
CPNE9-205ENST00000613455 CPXM2Q8N436 756 aa20.77■□□□□ 0.92
CPNE9-205ENST00000613455 ZSCAN18Q8TBC5 510 aaPredicted RBP20.77■□□□□ 0.92
CPNE9-205ENST00000613455 SNF8Q96H20 258 aa20.77■□□□□ 0.92
CPNE9-205ENST00000613455 C5orf42Q9H799 3197 aa20.77■□□□□ 0.91
CPNE9-205ENST00000613455 A0A1B0GVM2 712 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 TCAF2A6NFQ2 919 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 SEC31AO94979 1220 aaKnown RBP20.76■□□□□ 0.91
CPNE9-205ENST00000613455 WEE1P30291 646 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 OR1E1P30953 314 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 ADCY8P40145 1251 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 GPS1Q13098 491 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 TTC39BQ5VTQ0 682 aaPredicted RBP20.76■□□□□ 0.91
CPNE9-205ENST00000613455 ZDHHC24Q6UX98 284 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 CHST9Q7L1S5 443 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 ATPAF2Q8N5M1 289 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 EIF1ADQ8N9N8 165 aaKnown RBP20.76■□□□□ 0.91
CPNE9-205ENST00000613455 TSGA13Q96PP4 275 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 S1PR5Q9H228 398 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 ADAM7Q9H2U9 754 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 ZDHHC18Q9NUE0 388 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 DOCK8Q8NF50 2099 aa20.76■□□□□ 0.91
CPNE9-205ENST00000613455 C5orf60A6NFR6 353 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 CLDN11O75508 207 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 PAPOLAP51003 745 aaKnown RBP20.75■□□□□ 0.91
CPNE9-205ENST00000613455 WASHC5Q12768 1159 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 COL19A1Q14993 1142 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 P3H1Q32P28 736 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 GET4Q7L5D6 327 aaPredicted RBP20.75■□□□□ 0.91
CPNE9-205ENST00000613455 OR52K2Q8NGK3 314 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 CCDC110Q8TBZ0 833 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 FGF13Q92913 245 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 HMCESQ96FZ2 354 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 WHRNQ9P202 907 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 RASA4BC9J798 803 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 RNF103O00237 685 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 RASA4O43374 803 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 MAFKO60675 156 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 RAMP2O60895 175 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 GCATO75600 419 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 CLCN6P51797 869 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 ZNF33AQ06730 810 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 HLTFQ14527 1009 aaKnown RBP eCLIP20.75■□□□□ 0.91
CPNE9-205ENST00000613455 CCDC13Q8IYE1 715 aa20.75■□□□□ 0.91
CPNE9-205ENST00000613455 TDRD5Q8NAT2 981 aaKnown RBP20.75■□□□□ 0.91
CPNE9-205ENST00000613455 HJURPQ8NCD3 748 aaPredicted RBP20.75■□□□□ 0.91
CPNE9-205ENST00000613455 DENND4AQ7Z401 1863 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 KCNK1O00180 336 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 TBL1XO60907 577 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 CHKAP35790 457 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 LTBRP36941 435 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 LRRC49Q8IUZ0 686 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 FBXO25Q8TCJ0 367 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 AENQ8WTP8 325 aaKnown RBP20.74■□□□□ 0.91
CPNE9-205ENST00000613455 ART4Q93070 314 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 RSPRY1Q96DX4 576 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 LRRC3BQ96PB8 259 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 CEP41Q9BYV8 373 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 CLDND1Q9NY35 253 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 SEPT10Q9P0V9 454 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 PAK5Q9P286 719 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 XIRP2A4UGR9 3374 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 BRWD1Q9NSI6 2320 aa20.74■□□□□ 0.91
CPNE9-205ENST00000613455 SPTBN5Q9NRC6 3674 aaKnown RBP20.74■□□□□ 0.91
CPNE9-205ENST00000613455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms