RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LOC100653049A0A140TA62 436 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 GRXCR1A8MXD5 290 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 NRP1O14786 923 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SLC26A4O43511 780 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 KRT34O76011 436 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 DDHD2O94830 711 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF865P0CJ78 1059 aaPredicted RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ITGB6P18564 788 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 KRT4P19013 534 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 CCR1P32246 355 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 CCR3P51677 355 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 MYBPC3Q14896 1274 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 BOLA3Q53S33 107 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 NANOGNBQ7Z5D8 188 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 CLEC4CQ8WTT0 213 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 TFAP2BQ92481 460 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ATP13A1Q9HD20 1204 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 RBM22Q9NW64 420 aaKnown RBP eCLIP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 DSEQ9UL01 958 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 F8W810 466 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SPECC1L-ADORA2AF8WAN1 911 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 PCDH8O95206 1070 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 GLUD1P00367 558 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 CFHP08603 1231 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 MX2P20592 715 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 FOXN2P32314 431 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 TUFMP49411 452 aaKnown RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 TMED10P49755 219 aaKnown RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SZRD1Q7Z422 152 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SATL1Q86VE3 508 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 APLFQ8IW19 511 aaPredicted RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ATP6V0D2Q8N8Y2 350 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ATL2Q8NHH9 583 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF669Q96BR6 464 aaPredicted RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 EGFL8Q99944 293 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 GRIP2Q9C0E4 1043 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ELOVL4Q9GZR5 314 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ABCG8Q9H221 673 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 TCRBV7S2A1N4TA0A589 114 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 E7ENQ6 273 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 OR6B1O95007 311 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 SERPIND1P05546 499 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ADH1AP07327 375 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 TAC1P20366 129 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 CRADDP78560 199 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 POU6F1Q14863 301 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 OLFML1Q6UWY5 402 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 MARK2Q7KZI7 788 aaKnown RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 FAM35AQ86V20 835 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 FAM124AQ86V42 546 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 CIR1Q86X95 450 aaPredicted RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 RCOR2Q8IZ40 523 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ICA1LQ8NDH6 482 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 PXYLP1Q8TE99 480 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 CNBD2Q96M20 576 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 BTBD10Q9BSF8 475 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 LRMDAQ9H2I8 198 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ADAM7Q9H2U9 754 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ZDHHC4Q9NPG8 344 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ASAH2Q9NR71 780 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 CLDND1Q9NY35 253 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 GIT1Q9Y2X7 761 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 AXIN1O15169 862 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 PFDN6O15212 129 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 CFLARO15519 480 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 IMPDH2P12268 514 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 FUT4P22083 530 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 PBLDP30039 288 aaPredicted RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 FPGSQ05932 587 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 MPP2Q14168 576 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 HIF1AQ16665 826 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ZRANB3Q5FWF4 1079 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 PCED1BQ96HM7 432 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 FAM192AQ9GZU8 254 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 XPO7Q9UIA9 1087 aaKnown RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 COG5Q9UP83 839 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 TTC4O95801 387 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 RPA3P35244 121 aaPredicted RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 SOX11P35716 441 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ATP5C1P36542 298 aaKnown RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 PKN2Q16513 984 aaKnown RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 PTPN20Q4JDL3 420 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 PMF1Q6P1K2 205 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 DCLRE1AQ6PJP8 1040 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 KCNT2Q6UVM3 1135 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ADCK2Q7Z695 626 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 SLC13A5Q86YT5 568 aaPredicted RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 BBOF1Q8ND07 529 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ZFAND2BQ8WV99 257 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 UTP4Q969X6 686 aaKnown RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 BORCS6Q96GS4 357 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 NR1H4Q96RI1 486 aaPredicted RBP11.08□□□□□ -0.64
FAM3A-221ENST00000612856 TWNKQ96RR1 684 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 SPATA16Q9BXB7 569 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 GKN1Q9NS71 199 aa11.08□□□□□ -0.64
FAM3A-221ENST00000612856 DMAC2Q9NW81 257 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms