RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PLIN3O60664 434 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 SNNO75324 88 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 TPBGLP0DKB5 382 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 CCR10P46092 362 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 CBLBQ13191 982 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 UPP1Q16831 310 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 TEDDM1Q5T9Z0 273 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 C4orf22Q6V702 233 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 C4orf50Q6ZRC1 276 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 CRLF3Q8IUI8 442 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 PPP1R36Q96LQ0 422 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 C7orf26Q96N11 449 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 FAM167BQ9BTA0 163 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 ATXN3LQ9H3M9 355 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 SNX15Q9NRS6 342 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 CPSF2Q9P2I0 782 aaKnown RBP14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 LNPEPQ9UIQ6 1025 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 GABRQQ9UN88 632 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 TRPV2Q9Y5S1 764 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 M0QZ92 97 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 TRAFD1O14545 582 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 NMBRP28336 390 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 HOXC8P31273 242 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 ELF1P32519 619 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 ITGA9Q13797 1035 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 EML3Q32P44 896 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 ACSBG2Q5FVE4 666 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 FAM219BQ5XKK7 198 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 ATG16L1Q676U5 607 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 C17orf99Q6UX52 265 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 RASAL3Q86YV0 1011 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 CNTD1Q8N815 330 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 CXorf56Q9H5V9 222 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 PADI3Q9ULW8 664 aa14.41□□□□□ -0.1
PCDHGA3-202ENST00000612467 ZCWPW2A0A1B0GU75 182 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 CCDC22O60826 627 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 DNAJC6O75061 913 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 MOCS2O96007 188 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 POLBP06746 335 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 GSTA2P09210 222 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 MLNP12872 115 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 AVPR1AP37288 418 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 RGS2P41220 211 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 SERPINB9P50453 376 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 RASSF2P50749 326 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 CAP1Q01518 475 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 CACNB2Q08289 660 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 RAB41Q5JT25 222 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 TRIM68Q6AZZ1 485 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 BZW1Q7L1Q6 419 aaKnown RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 PSTKQ8IV42 348 aaKnown RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 RBM15BQ8NDT2 890 aaKnown RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 CDKL2Q92772 493 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 KATNAL1Q9BW62 490 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 SENP6Q9GZR1 1112 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 IGSF9Q9P2J2 1179 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 TXNDC16Q9P2K2 825 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 SORBS2O94875 1100 aaKnown RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 SLC1A6P48664 564 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 USP4Q13107 963 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 FSTL4Q6MZW2 842 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 CD300LGQ6UXG3 332 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 NAPRTQ6XQN6 538 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 SPATA6LQ8N4H0 392 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 SLC25A41Q8N5S1 370 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 EFCAB3Q8N7B9 438 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 DQX1Q8TE96 717 aaKnown RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 TRIB2Q92519 343 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 MCUR1Q96AQ8 359 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 NMRK2Q9NPI5 230 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 CNGB3Q9NQW8 809 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 MAN1C1Q9NR34 630 aa14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 IARS2Q9NSE4 1012 aaKnown RBP14.4□□□□□ -0.1
PCDHGA3-202ENST00000612467 ARHGAP42A6NI28 874 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 AP2A1O95782 977 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 GNAT1P11488 350 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 AKR1A1P14550 325 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 GNAZP19086 355 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 CALB2P22676 271 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 GARSP41250 739 aaKnown RBP14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 LHX1P48742 406 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 CLNS1AP54105 237 aaKnown RBP14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 PPIDQ08752 370 aaKnown RBP14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 CRHR2Q13324 411 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 ITGA7Q13683 1181 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 ZNF460Q14592 562 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 NOMO2Q5JPE7 1267 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 TEX9Q8N6V9 391 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 SMARCD1Q96GM5 515 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 APBA2Q99767 749 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 TLE6Q9H808 572 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 KCNK4Q9NYG8 393 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 CAPN14A8MX76 684 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 PROCP04070 461 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 ANKRD20A4Q4UJ75 823 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 TAF2Q6P1X5 1199 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 TIFABQ6ZNK6 161 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 SORT1Q99523 831 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 EIF2B3Q9NR50 452 aaKnown RBP14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 C20orf96Q9NUD7 363 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms