RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 CHP1Q99653 195 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 SCNM1Q9BWG6 230 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 PCED1AQ9H1Q7 454 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 APEX2Q9UBZ4 518 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 ASPMQ8IZT6 3477 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 USP27XA6NNY8 438 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 TRUB2O95900 331 aaKnown RBP22.47■■□□□ 1.19
CBWD3-207ENST00000611426 CCDC175P0C221 793 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 C7P10643 843 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 CSKP41240 450 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 APBA1Q02410 837 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 PDCLQ13371 301 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 HNRNPDQ14103 355 aaKnown RBP22.47■■□□□ 1.19
CBWD3-207ENST00000611426 DCAF6Q58WW2 860 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 ZC3H12AQ5D1E8 599 aaKnown RBP22.47■■□□□ 1.19
CBWD3-207ENST00000611426 REXO1L1PQ8IX06 675 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 SNX19Q92543 992 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 C6orf106Q9H6K1 298 aaPredicted RBP22.47■■□□□ 1.19
CBWD3-207ENST00000611426 TJP2Q9UDY2 1190 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 XPO7Q9UIA9 1087 aaKnown RBP22.47■■□□□ 1.19
CBWD3-207ENST00000611426 FHOD1Q9Y613 1164 aa22.47■■□□□ 1.19
CBWD3-207ENST00000611426 EPN1Q9Y6I3 576 aaPredicted RBP22.47■■□□□ 1.19
CBWD3-207ENST00000611426 H0Y626 953 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 KIF2AO00139 706 aaPredicted RBP22.46■■□□□ 1.19
CBWD3-207ENST00000611426 SH3BP5O60239 455 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 GJB3O75712 270 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 ASLP04424 464 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 PROS1P07225 676 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 RDXP35241 583 aaKnown RBP22.46■■□□□ 1.19
CBWD3-207ENST00000611426 TAF5Q15542 800 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 FSCBQ5H9T9 825 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 SFMBT2Q5VUG0 894 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 RAP1GAP2Q684P5 730 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 HGSNATQ68CP4 663 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 UNQ6494/PRO21346Q6UXR6 183 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 MMS22LQ6ZRQ5 1243 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 ZNF662Q6ZS27 426 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 LGI2Q8N0V4 545 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 BTN2A3PQ96KV6 586 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 STK33Q9BYT3 514 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 ADAM33Q9BZ11 813 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 BTBD1Q9H0C5 482 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 MTG2Q9H4K7 406 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 SLC12A6Q9UHW9 1150 aa22.46■■□□□ 1.19
CBWD3-207ENST00000611426 INTS6Q9UL03 887 aaKnown RBP22.46■■□□□ 1.19
CBWD3-207ENST00000611426 NUMA1Q14980 2115 aa22.45■■□□□ 1.19
CBWD3-207ENST00000611426 C1QTNF9BB2RNN3 333 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 EIF3CLB5ME19 914 aaKnown RBP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 LUC7L3O95232 432 aaKnown RBP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 NDUFA10O95299 355 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 MOCS3O95396 460 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 LCA5LO95447 670 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 SERPING1P05155 500 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 C1QTNF9P0C862 333 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 TACR2P21452 398 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 CYLC1P35663 651 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 PRKCIP41743 596 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 FAM193AP78312 1265 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 TTC31Q49AM3 519 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 ZNF776Q68DI1 518 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 CHSY1Q86X52 802 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 WDTC1Q8N5D0 677 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 MYO19Q96H55 970 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 CAMK1GQ96NX5 476 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 EIF3CQ99613 913 aaKnown RBP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 NLRC4Q9NPP4 1024 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 KIAA1522Q9P206 1035 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 ARHGAP20Q9P2F6 1191 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 PCDHB9Q9Y5E1 797 aa22.45■■□□□ 1.18
CBWD3-207ENST00000611426 BZW2Q9Y6E2 419 aaKnown RBP22.45■■□□□ 1.18
CBWD3-207ENST00000611426 SEMA4FO95754 770 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 IGLV3-25P01717 112 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 ASTE1Q2TB18 679 aaPredicted RBP22.44■■□□□ 1.18
CBWD3-207ENST00000611426 PITRM1Q5JRX3 1037 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 IL27RAQ6UWB1 636 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 PASD1Q8IV76 773 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 ATP6V0D2Q8N8Y2 350 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 C1orf216Q8TAB5 229 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 GANCQ8TET4 914 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 SHC3Q92529 594 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 MRGPRX3Q96LB0 322 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 RSPH9Q9H1X1 276 aaPredicted RBP22.44■■□□□ 1.18
CBWD3-207ENST00000611426 GAREM1Q9H706 876 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 FAM204AQ9H8W3 233 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 NHEJ1Q9H9Q4 299 aaPredicted RBP22.44■■□□□ 1.18
CBWD3-207ENST00000611426 ERVW-1Q9UQF0 538 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 NCKAP1Q9Y2A7 1128 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.44■■□□□ 1.18
CBWD3-207ENST00000611426 CEP83Q9Y592 693 aa22.44■■□□□ 1.18
CBWD3-207ENST00000611426 AKAP13Q12802 2813 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 KCNU1A8MYU2 1149 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 HYAL3O43820 417 aaPredicted RBP22.43■■□□□ 1.18
CBWD3-207ENST00000611426 RNASEH1O60930 286 aaKnown RBP22.43■■□□□ 1.18
CBWD3-207ENST00000611426 SIN3BO75182 1162 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 PITX1P78337 314 aaPredicted RBP22.43■■□□□ 1.18
CBWD3-207ENST00000611426 PTK2Q05397 1052 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 TRIP6Q15654 476 aaKnown RBP22.43■■□□□ 1.18
CBWD3-207ENST00000611426 HNRNPA1L2Q32P51 320 aaKnown RBP22.43■■□□□ 1.18
CBWD3-207ENST00000611426 EFHC1Q5JVL4 640 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms