RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PMM2O15305 246 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 E2F6O75461 281 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 MYO1DO94832 1006 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 APOA4P06727 396 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CNTFP26441 200 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PLIN5Q00G26 463 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 MAPRE2Q15555 327 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 LRRC36Q1X8D7 754 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TTLL9Q3SXZ7 439 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 AARS2Q5JTZ9 985 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SDE2Q6IQ49 451 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 NEPROQ6NW34 567 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CRELD2Q6UXH1 353 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 UNC5AQ6ZN44 842 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 RBM23Q86U06 439 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 MTDHQ86UE4 582 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CCDC185Q8N715 623 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SNX31Q8N9S9 440 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 DQX1Q8TE96 717 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TSPAN18Q96SJ8 248 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 C16orf70Q9BSU1 422 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 NEUROG2Q9H2A3 272 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 HAO1Q9UJM8 370 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 MYH1P12882 1939 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 MOXD2PA6NHM9 499 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 C2CD4BA6NLJ0 364 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 PRPF4O43172 522 aaKnown RBP eCLIP7.42□□□□□ -1.225e-7■■■■□ 22.3
CSDE1-218ENST00000610726 KLHL2O95198 593 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 CYP3A5P20815 502 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 PSEN1P49768 467 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 CDK16Q00536 496 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 NOMO1Q15155 1222 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 FUT10Q6P4F1 479 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 GLT6D1Q7Z4J2 308 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 SAPCD2Q86UD0 394 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 TUBGCP3Q96CW5 907 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 LRRC39Q96DD0 335 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 ARHGAP39Q9C0H5 1083 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 DPP7Q9UHL4 492 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 GLI3P10071 1580 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 MYH6P13533 1939 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 E9PBE3 544 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 KPNA3O00505 521 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 TM9SF1O15321 606 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 KLHL41O60662 606 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 XYLBO75191 536 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 CXCL14O95715 111 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 EDNRBP24530 442 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 GABRR2P28476 465 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 TNFRSF8P28908 595 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 PBLDP30039 288 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 SERPINH1P50454 418 aaKnown RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 VARS2Q5ST30 1063 aaKnown RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 CDCA2Q69YH5 1023 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 IQCKQ8N0W5 287 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 SCAMP5Q8TAC9 235 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 FIZ1Q96SL8 496 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 ACBD6Q9BR61 282 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 MRPL1Q9BYD6 325 aaKnown RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 PRKD2Q9BZL6 878 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 RGS18Q9NS28 235 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 PCDHGB4Q9UN71 923 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 AURKCQ9UQB9 309 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 SNX10Q9Y5X0 201 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 STRCQ7RTU9 1775 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 ZBTB22O15209 634 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 TLL1O43897 1013 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 MFSD11O43934 449 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 TMCC1O94876 653 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 LMNAP02545 664 aaKnown RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 TCF4P15884 667 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 EEF1B2P24534 225 aaKnown RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 RPA3P35244 121 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-218ENST00000610726 NME5P56597 212 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 TLE2Q04725 743 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 BTKQ06187 659 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF284Q2VY69 593 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 SPANXN3Q5MJ09 141 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF697Q5TEC3 545 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 PDPK2PQ6A1A2 396 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 TXNRD3NBQ6F5E7 133 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 VSTM1Q6UX27 236 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 MREGQ8N565 214 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 CMTM5Q96DZ9 223 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 NSL1Q96IY1 281 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 RHOBTB2Q9BYZ6 727 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 ASAH2Q9NR71 780 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 NDE1Q9NXR1 346 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 NCKIPSDQ9NZQ3 722 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 SIX4Q9UIU6 781 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 FAM50BQ9Y247 325 aa7.42□□□□□ -1.22
CSDE1-218ENST00000610726 UBOX5O94941 541 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 LUC7L3O95232 432 aaKnown RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ADH1AP07327 375 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TKTP29401 623 aaKnown RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 SERPINB5P36952 375 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 PPP3CCP48454 512 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 AP2B1P63010 937 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 BCL2L1Q07817 233 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TMEM259Q4ZIN3 620 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms