RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 THOP1P52888 689 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 PEX6Q13608 980 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 TMEM132DQ14C87 1099 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 SEL1L3Q68CR1 1132 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 PMF1Q6P1K2 205 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 DPH6Q7L8W6 267 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 SLC26A9Q7LBE3 791 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 RBM12BQ8IXT5 1001 aaKnown RBP22.85■■□□□ 1.25
SHANK2-220ENST00000608988 CDRT15Q96T59 188 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 SYBUQ9NX95 663 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 LMCD1Q9NZU5 365 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 GNEQ9Y223 722 aaKnown RBP22.85■■□□□ 1.25
SHANK2-220ENST00000608988 USP3Q9Y6I4 520 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 PIK3R2O00459 728 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 B4GALT5O43286 388 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 ADCY6O43306 1168 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 TIMM44O43615 452 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 ARL4AP40617 200 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 RGS7P49802 495 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 TMEM192Q8IY95 271 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 EFCAB3Q8N7B9 438 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 MAPK15Q8TD08 544 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 SLC35F5Q8WV83 523 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 TOP1MTQ969P6 601 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 GRIP2Q9C0E4 1043 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 IL22Q9GZX6 179 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 DRC3Q9H069 523 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 EFCAB1Q9HAE3 211 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 ZNF277Q9NRM2 450 aaPredicted RBP22.85■■□□□ 1.25
SHANK2-220ENST00000608988 OXSMQ9NWU1 459 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 CCDC160A6NGH7 325 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 RNF103O00237 685 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 PAPSS1O43252 624 aaPredicted RBP22.84■■□□□ 1.25
SHANK2-220ENST00000608988 IMPDH2P12268 514 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 PTPRAP18433 802 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 SLC26A2P50443 739 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 RPL14P50914 215 aaKnown RBP22.84■■□□□ 1.25
SHANK2-220ENST00000608988 INHBCP55103 352 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 MRPS22P82650 360 aaKnown RBP22.84■■□□□ 1.25
SHANK2-220ENST00000608988 SULT2A1Q06520 285 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 PRKAA1Q13131 559 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 DCTN2Q13561 401 aaKnown RBP22.84■■□□□ 1.25
SHANK2-220ENST00000608988 LRRC71Q8N4P6 559 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 PDCD6IPQ8WUM4 868 aaKnown RBP22.84■■□□□ 1.25
SHANK2-220ENST00000608988 CNBD2Q96M20 576 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 OR52B2Q96RD2 323 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 SQORQ9Y6N5 450 aa22.84■■□□□ 1.25
SHANK2-220ENST00000608988 XRCC1P18887 633 aaPredicted RBP22.83■■□□□ 1.25
SHANK2-220ENST00000608988 SERPINB5P36952 375 aa22.83■■□□□ 1.25
SHANK2-220ENST00000608988 PDK1Q15118 436 aa22.83■■□□□ 1.25
SHANK2-220ENST00000608988 NAPRTQ6XQN6 538 aa22.83■■□□□ 1.25
SHANK2-220ENST00000608988 STRADAQ7RTN6 431 aa22.83■■□□□ 1.25
SHANK2-220ENST00000608988 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.83■■□□□ 1.25
SHANK2-220ENST00000608988 DIS3LQ8TF46 1054 aaKnown RBP22.83■■□□□ 1.25
SHANK2-220ENST00000608988 NMRAL1Q9HBL8 299 aa22.83■■□□□ 1.25
SHANK2-220ENST00000608988 EPS15L1Q9UBC2 864 aa22.83■■□□□ 1.25
SHANK2-220ENST00000608988 RPS6KL1Q9Y6S9 549 aa22.83■■□□□ 1.25
SHANK2-220ENST00000608988 A0A096LPK6 155 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 HNRNPRO43390 633 aaKnown RBP22.83■■□□□ 1.24
SHANK2-220ENST00000608988 ERVK-10P10266 1014 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 PHKA2P46019 1235 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 HMGCS2P54868 508 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 ZNF280AP59817 542 aaPredicted RBP22.83■■□□□ 1.24
SHANK2-220ENST00000608988 CRADDP78560 199 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 ZYG11AQ6WRX3 759 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 STRA8Q7Z7C7 330 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 LRRN4Q8WUT4 740 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 GATA5Q9BWX5 397 aaPredicted RBP22.83■■□□□ 1.24
SHANK2-220ENST00000608988 COPS7BQ9H9Q2 264 aaPredicted RBP22.83■■□□□ 1.24
SHANK2-220ENST00000608988 MAN1C1Q9NR34 630 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 UTP6Q9NYH9 597 aaKnown RBP22.83■■□□□ 1.24
SHANK2-220ENST00000608988 AK5Q9Y6K8 562 aa22.83■■□□□ 1.24
SHANK2-220ENST00000608988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.82■■□□□ 1.24
SHANK2-220ENST00000608988 CDK4P11802 303 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 PSMD8P48556 350 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 TXNL4AP83876 142 aaKnown RBP22.82■■□□□ 1.24
SHANK2-220ENST00000608988 LSM12Q3MHD2 195 aaKnown RBP22.82■■□□□ 1.24
SHANK2-220ENST00000608988 FAM182AQ5T1J6 154 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 LIPMQ5VYY2 423 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 ARHGAP17Q68EM7 881 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 TTC30AQ86WT1 665 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 NUP93Q8N1F7 819 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 BHLHE22Q8NFJ8 381 aaPredicted RBP22.82■■□□□ 1.24
SHANK2-220ENST00000608988 NLRP7Q8WX94 980 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 PRPF18Q99633 342 aaKnown RBP22.82■■□□□ 1.24
SHANK2-220ENST00000608988 MRPL1Q9BYD6 325 aaKnown RBP22.82■■□□□ 1.24
SHANK2-220ENST00000608988 WDR41Q9HAD4 459 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 DNAAF2Q9NVR5 837 aaKnown RBP22.82■■□□□ 1.24
SHANK2-220ENST00000608988 NSMCE4AQ9NXX6 385 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 CDYLQ9Y232 598 aa22.82■■□□□ 1.24
SHANK2-220ENST00000608988 SPDYE16A6NNV3 312 aaPredicted RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 TRIM38O00635 465 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 TRMUO75648 421 aaKnown RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 CABYRO75952 493 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 ZNF23P17027 643 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 PSMC3P17980 439 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 IFRD2Q12894 506 aaPredicted RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 ART3Q13508 389 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 PPP1R26Q5T8A7 1209 aaPredicted RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 CMC1Q7Z7K0 106 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms