RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 SNAP91O60641 907 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 PAX7P23759 505 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 ANGPT1Q15389 498 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 FAM187BQ17R55 369 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 ZNF467Q7Z7K2 595 aaPredicted RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 PHF13Q86YI8 300 aaPredicted RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 ACSS3Q9H6R3 686 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 DDX43Q9NXZ2 648 aaKnown RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 FSCN2O14926 492 aa21.45■■□□□ 1.03
SH3D19-211ENST00000604030 AMPD1P23109 780 aa21.45■■□□□ 1.03
SH3D19-211ENST00000604030 ACAT1P24752 427 aaKnown RBP21.45■■□□□ 1.03
SH3D19-211ENST00000604030 OTUD3Q5T2D3 398 aaPredicted RBP21.45■■□□□ 1.03
SH3D19-211ENST00000604030 PLEKHH3Q7Z736 793 aa21.45■■□□□ 1.03
SH3D19-211ENST00000604030 GINS4Q9BRT9 223 aa21.45■■□□□ 1.03
SH3D19-211ENST00000604030 ZCCHC2Q9C0B9 1178 aaKnown RBP21.45■■□□□ 1.03
SH3D19-211ENST00000604030 ELOVL4Q9GZR5 314 aa21.45■■□□□ 1.03
SH3D19-211ENST00000604030 SERPINA6P08185 405 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 LRPAP1P30533 357 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 TNK2Q07912 1038 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 DEPDC7Q96QD5 511 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 TRIM38O00635 465 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 HS6ST1O60243 411 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 VAPBO95292 243 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 DSG3P32926 999 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 PTDSS1P48651 473 aaKnown RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 GTF2BQ00403 316 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 INO80DQ53TQ3 878 aaPredicted RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 MILR1Q7Z6M3 343 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 TMEM86AQ8N2M4 240 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 MAGEC3Q8TD91 643 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 MAGEB10Q96LZ2 347 aaPredicted RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 PRDM5Q9NQX1 630 aaPredicted RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 RPS6KB2Q9UBS0 482 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 RSL24D1Q9UHA3 163 aaKnown RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 PADI4Q9UM07 663 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 DOLKQ9UPQ8 538 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 NPM3O75607 178 aaKnown RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 HSMCR30P0CW71 290 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 ATP5F1P24539 256 aaPredicted RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 TBX4P57082 545 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 ULK2Q8IYT8 1036 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 L3MBTL3Q96JM7 780 aaPredicted RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 TSEN34Q9BSV6 310 aaKnown RBP21.45■■□□□ 1.02
SH3D19-211ENST00000604030 POPDC2Q9HBU9 364 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 PRDM4Q9UKN5 801 aa21.45■■□□□ 1.02
SH3D19-211ENST00000604030 EPB42P16452 691 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 RBL1P28749 1068 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 IL12RB1P42701 662 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 PRKCQQ04759 706 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 MAMLD1Q13495 774 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 ATP1A4Q13733 1029 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 BMT2Q1RMZ1 405 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 SPPL2AQ8TCT8 520 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 UTP15Q8TED0 518 aaKnown RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 RGSL1A5PLK6 1076 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 PRR23AA6NEV1 266 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 FAM25AB3EWG3 89 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 FAM25CB3EWG5 89 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 FAM25GB3EWG6 89 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 DYRK3O43781 588 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 CCNT2O60583 730 aaKnown RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 PAX3P23760 479 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 EIF2B2P49770 351 aaKnown RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 CLCN5P51795 746 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 ADIGQ0VDE8 80 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 RIPK1Q13546 671 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 TRIM25Q14258 630 aaKnown RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 NEDD8Q15843 81 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 BBS12Q6ZW61 710 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 PIWIL4Q7Z3Z4 852 aaKnown RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 FBXW8Q8N3Y1 598 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 IDI2Q9BXS1 227 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 CLEC4MQ9H2X3 399 aaPredicted RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 MORF4L1Q9UBU8 362 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 MTF2Q9Y483 593 aaPredicted RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 LTA4HP09960 611 aaKnown RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 MMP13P45452 471 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 NECAB2Q7Z6G3 386 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 ZNF605Q86T29 641 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 NKAPQ8N5F7 415 aaKnown RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 PRELID2Q8N945 189 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 BHLHE22Q8NFJ8 381 aaPredicted RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 MCOLN3Q8TDD5 553 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 INPP4AQ96PE3 977 aaPredicted RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 ZNF143P52747 638 aaPredicted RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 MARSP56192 900 aaKnown RBP21.44■■□□□ 1.02
SH3D19-211ENST00000604030 BROXQ5VW32 411 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 CDC73Q6P1J9 531 aa21.44■■□□□ 1.02
SH3D19-211ENST00000604030 MYL12AP19105 171 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 IKBIPQ70UQ0 350 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 CHMP1BQ7LBR1 199 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 SHC3Q92529 594 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 CDHR5Q9HBB8 845 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 C2CD2Q9Y426 696 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 PCDHB5Q9Y5E4 795 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 ROBO3Q96MS0 1386 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 GSTM1P09488 218 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 CLTBP09497 229 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 COX4I1P13073 169 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 S100A3P33764 101 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms