RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 CXorf57Q6NSI4 855 aaKnown RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SLC20A1Q8WUM9 679 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SNX19Q92543 992 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 RPL10LQ96L21 214 aaKnown RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 TBCBQ99426 244 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 ADAM33Q9BZ11 813 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 ZDHHC5Q9C0B5 715 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 PABPC3Q9H361 631 aaKnown RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SLC32A1Q9H598 525 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SGK2Q9HBY8 427 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 EIF2B4Q9UI10 523 aaKnown RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SLCO3A1Q9UIG8 710 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 NCKAP1Q9Y2A7 1128 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 ACACBO00763 2458 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 NUMA1Q14980 2115 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 GIPC1O14908 333 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 BCAT2O15382 392 aaPredicted RBP18.65■□□□□ 0.58
CCDC12-208ENST00000603885 CLDN11O75508 207 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 ADCY5O95622 1261 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 FLT3P36888 993 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 STAT1P42224 750 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 STK19P49842 368 aaPredicted RBP18.65■□□□□ 0.58
CCDC12-208ENST00000603885 IRAK1P51617 712 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 SEMA3BQ13214 749 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 CST6Q15828 149 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 LRSAM1Q6UWE0 723 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 USP30Q70CQ3 517 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 DEFB124Q8NES8 71 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 NEK11Q8NG66 645 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 GANCQ8TET4 914 aa18.65■□□□□ 0.58
CCDC12-208ENST00000603885 C6orf106Q9H6K1 298 aaPredicted RBP18.65■□□□□ 0.58
CCDC12-208ENST00000603885 UPK3BL1B0FP48 263 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 UPK3BL2E5RIL1 263 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 CYP1A1P04798 512 aaPredicted RBP18.64■□□□□ 0.57
CCDC12-208ENST00000603885 ZNF18P17022 549 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 PMLP29590 882 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 NUMBP49757 651 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 CDH4P55283 916 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 FMO1Q01740 532 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 UBXN1Q04323 297 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 TYRO3Q06418 890 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 ZNF252P-AS1Q0IIN9 211 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 GRIK2Q13002 908 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 C5orf22Q49AR2 442 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 ACBD5Q5T8D3 534 aaPredicted RBP18.64■□□□□ 0.57
CCDC12-208ENST00000603885 TRIM72Q6ZMU5 477 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 ARCQ7LC44 396 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 C14orf80Q86SX3 495 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 MMAAQ8IVH4 418 aaKnown RBP18.64■□□□□ 0.57
CCDC12-208ENST00000603885 OR2I1PQ8NGU4 316 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 FEM1AQ9BSK4 669 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 ANLNQ9NQW6 1124 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 DNAAF2Q9NVR5 837 aaKnown RBP18.64■□□□□ 0.57
CCDC12-208ENST00000603885 FBXL12Q9NXK8 326 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 SLC25A13Q9UJS0 675 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 TMEM59LQ9UK28 342 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.64■□□□□ 0.57
CCDC12-208ENST00000603885 CHD8Q9HCK8 2581 aa18.64■□□□□ 0.57
CCDC12-208ENST00000603885 MID1O15344 667 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 CHRNB2P17787 502 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 ELAVL3Q14576 367 aaKnown RBP18.63■□□□□ 0.57
CCDC12-208ENST00000603885 NCAPHQ15003 741 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 LRRC31Q6UY01 552 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 AOPEPQ8N6M6 819 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 PTPRN2Q92932 1015 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 CFAP57Q96MR6 1250 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 CNTNAP3BQ96NU0 1288 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 OMDQ99983 421 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 CNTNAP3Q9BZ76 1288 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 NAT10Q9H0A0 1025 aaKnown RBP18.63■□□□□ 0.57
CCDC12-208ENST00000603885 METTL5Q9NRN9 209 aaKnown RBP18.63■□□□□ 0.57
CCDC12-208ENST00000603885 VPS28Q9UK41 221 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 ANGPTL2Q9UKU9 493 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 TBC1D30Q9Y2I9 924 aa18.63■□□□□ 0.57
CCDC12-208ENST00000603885 LRRC10BA6NIK2 292 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 I6L893 689 aaPredicted RBP18.62■□□□□ 0.57
CCDC12-208ENST00000603885 RNASEH2AO75792 299 aaKnown RBP18.62■□□□□ 0.57
CCDC12-208ENST00000603885 ADH1BP00325 375 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 MMP8P22894 467 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 SLC8A1P32418 973 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 RDXP35241 583 aaKnown RBP18.62■□□□□ 0.57
CCDC12-208ENST00000603885 PSMD8P48556 350 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 VASPP50552 380 aaPredicted RBP18.62■□□□□ 0.57
CCDC12-208ENST00000603885 TRNP1Q6NT89 227 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 PIP4P1Q86T03 277 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 STK40Q8N2I9 435 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 OR52K2Q8NGK3 314 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 C1orf216Q8TAB5 229 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 BIRC7Q96CA5 298 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 ALG14Q96F25 216 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 C1orf74Q96LT6 269 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 ERGIC2Q96RQ1 377 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 FAM129BQ96TA1 746 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 C11orf70Q9BRQ4 267 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 MUC3BQ9H195 1237 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 FZD4Q9ULV1 537 aa18.62■□□□□ 0.57
CCDC12-208ENST00000603885 CEP295Q9C0D2 2601 aa18.61■□□□□ 0.57
CCDC12-208ENST00000603885 NYNRINQ9P2P1 1898 aaKnown RBP18.61■□□□□ 0.57
CCDC12-208ENST00000603885 A0A1W2PP55 124 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms