RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	PDX1	P52945	283 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	KCNMA1	Q12791	1236 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	STAT4	Q14765	748 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	SLC39A14	Q15043	492 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	POM121L1P	Q3SYA9	428 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	AGBL4	Q5VU57	503 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	BSPRY	Q5W0U4	402 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	UNC13D	Q70J99	1090 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	SLC9A9	Q8IVB4	645 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	SLC22A18AS	Q8N1D0	253 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	IFI44	Q8TCB0	444 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	TMC2	Q8TDI7	906 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	USP28	Q96RU2	1077 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	CCNL2	Q96S94	520 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	IRX2	Q9BZI1	471 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	NIF3L1	Q9GZT8	377 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	KDM4C	Q9H3R0	1056 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	NLGN3	Q9NZ94	848 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	STIM2	Q9P246	746 aa		11.43	□□□□□ -0.58
NUP62-222	ENST00000600935	SPTBN1	Q01082	2364 aa	Known RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	CLEC18A	A5D8T8	446 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	PRAMEF26	H0Y7S4	382 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935		K7ESM1	405 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	IKBKB	O14920	756 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	IRAK2	O43187	625 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	ACSL4	O60488	711 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	AFP	P02771	609 aa	Known RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	THEGL	P0DJG4	465 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	GP1BB	P13224	206 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	TRIM21	P19474	475 aa	Known RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	RBMS1	P29558	406 aa	Known RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	RAD23B	P54727	409 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	TAS2R38	P59533	333 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	ECT2L	Q008S8	904 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	SRSF6	Q13247	344 aa	Known RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	ELAVL3	Q14576	367 aa	Known RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	ZSCAN23	Q3MJ62	389 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	ARHGAP17	Q68EM7	881 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	MSANTD2	Q6P1R3	559 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	CLEC18B	Q6UXF7	455 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	APCDD1	Q8J025	514 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	ANKRD52	Q8NB46	1076 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	HJURP	Q8NCD3	748 aa	Predicted RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	CLEC18C	Q8NCF0	446 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	MAPK15	Q8TD08	544 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	FRS2	Q8WU20	508 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	EXTL1	Q92935	676 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	TATDN2	Q93075	761 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	CCDC97	Q96F63	343 aa	Predicted RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	KLHDC7B	Q96G42	594 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	RPL10L	Q96L21	214 aa	Known RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	HEXIM2	Q96MH2	286 aa	Known RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	NOX5	Q96PH1	765 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	LRRC27	Q9C0I9	530 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	CUEDC2	Q9H467	287 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	CSMD1	Q96PZ7	3565 aa		11.42	□□□□□ -0.58
NUP62-222	ENST00000600935	VPS37C	A5D8V6	355 aa	Predicted RBP	11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	SCAMP1	O15126	338 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	SLC7A4	O43246	635 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	NOBOX	O60393	691 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	GABBR2	O75899	941 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	NEBL	O76041	1014 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	CENPB	P07199	599 aa	Predicted RBP	11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	FAM87A	P0C7U9	286 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	C1QBP	Q07021	282 aa	Known RBP	11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	PPP3CA	Q08209	521 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	ADIG	Q0VDE8	80 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	CNTN1	Q12860	1018 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	RABEP1	Q15276	862 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	SETMAR	Q53H47	684 aa	Predicted RBP	11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	GUSBP11	Q6P575	273 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	CARNMT1	Q8N4J0	409 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	ZNF557	Q8N988	423 aa	Predicted RBP	11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	OR13H1	Q8NG92	308 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	GOLGA5	Q8TBA6	731 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	RNF139	Q8WU17	664 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	AZIN2	Q96A70	460 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	DHX58	Q96C10	678 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	GRAMD1A	Q96CP6	724 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	MYOC	Q99972	504 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	ABCG4	Q9H172	646 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	NUCKS1	Q9H1E3	243 aa	Known RBP	11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	BLZF1	Q9H2G9	400 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	KCTD10	Q9H3F6	313 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	USP29	Q9HBJ7	922 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	FZD3	Q9NPG1	666 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	CRYBG3	Q68DQ2	2970 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	SCN8A	Q9UQD0	1980 aa		11.41	□□□□□ -0.58
NUP62-222	ENST00000600935	XPO1	O14980	1071 aa	Known RBP	11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	ITGB2	P05107	769 aa		11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	TRIM49	P0CI25	452 aa		11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	TRIM49C	P0CI26	452 aa		11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	PRLR	P16471	622 aa		11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	GCLM	P48507	274 aa		11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	SLC11A2	P49281	568 aa		11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	NUMB	P49757	651 aa		11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	DUSP3	P51452	185 aa	Predicted RBP	11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	DAOA	P59103	153 aa		11.4	□□□□□ -0.58
NUP62-222	ENST00000600935	AMPD3	Q01432	767 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms