RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 UCMAQ8WVF2 138 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 ALG14Q96F25 216 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 TSGA10Q9BZW7 698 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 PCDH18Q9HCL0 1135 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 OR51B4Q9Y5P0 310 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 H3BRJ5 948 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 FGF10O15520 208 aaPredicted RBP19.87■□□□□ 0.77
UPF1-209ENST00000600310 ATG13O75143 517 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 MOCS3O95396 460 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 RHOCP08134 193 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 HNRNPLP14866 589 aaKnown RBP eCLIP19.87■□□□□ 0.77
UPF1-209ENST00000600310 GOT1P17174 413 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 MZF1P28698 734 aaPredicted RBP19.87■□□□□ 0.77
UPF1-209ENST00000600310 HOXD11P31277 338 aaPredicted RBP19.87■□□□□ 0.77
UPF1-209ENST00000600310 TIE1P35590 1138 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 ARSEP51690 589 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 E2F5Q15329 346 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 IFI16Q16666 785 aaKnown RBP19.87■□□□□ 0.77
UPF1-209ENST00000600310 ATP13A4Q4VNC1 1196 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 C2orf27AQ580R0 203 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 PITRM1Q5JRX3 1037 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 EGFLAMQ63HQ2 1017 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 PKN3Q6P5Z2 889 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 RFX8Q6ZV50 586 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 APCDD1Q8J025 514 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 SPEM1Q8N4L4 309 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 ZNF513Q8N8E2 541 aaPredicted RBP19.87■□□□□ 0.77
UPF1-209ENST00000600310 DTWD2Q8NBA8 298 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 RPLP0P6Q8NHW5 317 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 TTC17Q96AE7 1141 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 FEM1AQ9BSK4 669 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 CIPCQ9C0C6 399 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 KCNF1Q9H3M0 494 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 GOLPH3Q9H4A6 298 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 CWC15Q9P013 229 aaKnown RBP19.87■□□□□ 0.77
UPF1-209ENST00000600310 HYOU1Q9Y4L1 999 aa19.87■□□□□ 0.77
UPF1-209ENST00000600310 ILVBLA1L0T0 632 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 MACROD2A1Z1Q3 448 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 SPOPO43791 374 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 ATP5BP06576 529 aaKnown RBP19.86■□□□□ 0.77
UPF1-209ENST00000600310 POLR2EP19388 210 aaKnown RBP19.86■□□□□ 0.77
UPF1-209ENST00000600310 GJC1P36383 396 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 ARL4AP40617 200 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 CDH6P55285 790 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 MTAPQ13126 283 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 RNF219Q5W0B1 726 aaPredicted RBP19.86■□□□□ 0.77
UPF1-209ENST00000600310 DAAM2Q86T65 1068 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 RHOT1Q8IXI2 618 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 RNF10Q8N5U6 811 aaKnown RBP19.86■□□□□ 0.77
UPF1-209ENST00000600310 IL17RCQ8NAC3 791 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 TSC1Q92574 1164 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 ZNF830Q96NB3 372 aaPredicted RBP19.86■□□□□ 0.77
UPF1-209ENST00000600310 NDFIP2Q9NV92 336 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 DONSONQ9NYP3 566 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 RCOR3Q9P2K3 495 aaPredicted RBP19.86■□□□□ 0.77
UPF1-209ENST00000600310 THAP10Q9P2Z0 257 aaPredicted RBP19.86■□□□□ 0.77
UPF1-209ENST00000600310 MIA3Q5JRA6 1907 aa19.86■□□□□ 0.77
UPF1-209ENST00000600310 GRID2IPA4D2P6 1211 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 NPC1O15118 1278 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 DAPK3O43293 454 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 KRT86O43790 486 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 ASLP04424 464 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 DLDP09622 509 aaKnown RBP19.85■□□□□ 0.77
UPF1-209ENST00000600310 NUBP1P53384 320 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 DPYSQ14117 519 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 KRT81Q14533 505 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 PDK2Q15119 407 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 TRMT11Q7Z4G4 463 aaKnown RBP19.85■□□□□ 0.77
UPF1-209ENST00000600310 ALLCQ8N6M5 410 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 LRRC57Q8N9N7 239 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 KCTD6Q8NC69 237 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 SORCS1Q8WY21 1168 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 ACDQ96AP0 544 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 CSPG4P5Q96PW8 444 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 SPATA6Q9NWH7 488 aaPredicted RBP19.85■□□□□ 0.77
UPF1-209ENST00000600310 DNAI1Q9UI46 699 aa19.85■□□□□ 0.77
UPF1-209ENST00000600310 A0A0D9SEW6 157 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 PSTPIP1O43586 416 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 KLF8O95600 359 aaPredicted RBP19.84■□□□□ 0.77
UPF1-209ENST00000600310 ERCC2P18074 760 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 IL4RP24394 825 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 GNA12Q03113 381 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 SULT2A1Q06520 285 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 ENPP2Q13822 863 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 PTPRNQ16849 979 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 EOGTQ5NDL2 527 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 SYT13Q7L8C5 426 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 MAP7D3Q8IWC1 876 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 CHPFQ8IZ52 775 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 CCDC33Q8N5R6 958 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 TXNDC5Q8NBS9 432 aaKnown RBP19.84■□□□□ 0.77
UPF1-209ENST00000600310 KIAA1524Q8TCG1 905 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 CYB5D2Q8WUJ1 264 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 RAPGEF5Q92565 580 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 ACOX2Q99424 681 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 MUC3BQ9H195 1237 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 ZDHHC4Q9NPG8 344 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 VPS28Q9UK41 221 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 PLA2G4CQ9UP65 541 aa19.84■□□□□ 0.77
UPF1-209ENST00000600310 PPP2R2CQ9Y2T4 447 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms