RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 NUDT1P36639 197 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 PPP1R2P41236 205 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 GPD2P43304 727 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 ABCG1P45844 678 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 NXPH1P58417 271 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 SULT2A1Q06520 285 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 MEA1Q16626 185 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 SYPL2Q5VXT5 272 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 RRAGAQ7L523 313 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 TAC4Q86UU9 113 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 CHSY1Q86X52 802 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 APCDD1Q8J025 514 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 ADAM32Q8TC27 787 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 RPL10LQ96L21 214 aaKnown RBP17.75■□□□□ 0.43
SMG9-210ENST00000600097 BBC3Q96PG8 261 aaPredicted RBP17.75■□□□□ 0.43
SMG9-210ENST00000600097 KDM4CQ9H3R0 1056 aa17.75■□□□□ 0.43
SMG9-210ENST00000600097 ASXL3Q9C0F0 2248 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3DA0A087WVF3 549 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3IA0A087WXS9 549 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3EA0A087X179 549 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3KA0A087X1G2 549 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 GOLGA6L4A6NEF3 574 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3FA6NER0 549 aaPredicted RBP17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3LB9A6J9 549 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 F5H5T6 163 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 MAGEC1O60732 1142 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3HP0C7X1 549 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TACR2P21452 398 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 MZF1P28698 734 aaPredicted RBP17.74■□□□□ 0.43
SMG9-210ENST00000600097 RXRGP48443 463 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 ACADVLP49748 655 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 OXCT1P55809 520 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 DNAJC3Q13217 504 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 ZC3H12AQ5D1E8 599 aaKnown RBP17.74■□□□□ 0.43
SMG9-210ENST00000600097 RAP1GAP2Q684P5 730 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3GQ6DHY5 549 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3CQ6IPX1 549 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 NAPEPLDQ6IQ20 393 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 DSG4Q86SJ6 1040 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 PRPF39Q86UA1 669 aaKnown RBP17.74■□□□□ 0.43
SMG9-210ENST00000600097 TBC1D3Q8IZP1 549 aaPredicted RBP17.74■□□□□ 0.43
SMG9-210ENST00000600097 EID2Q8N6I1 236 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 ATP6V0D2Q8N8Y2 350 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 MFSD2AQ8NA29 543 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 TSC1Q92574 1164 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 DCBLD2Q96PD2 775 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 SPAG5Q96R06 1193 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 PPP1R9BQ96SB3 815 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 POPDC2Q9HBU9 364 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.74■□□□□ 0.43
SMG9-210ENST00000600097 SLC12A6Q9UHW9 1150 aa17.74■□□□□ 0.43
SMG9-210ENST00000600097 XPO7Q9UIA9 1087 aaKnown RBP17.74■□□□□ 0.43
SMG9-210ENST00000600097 CBX4O00257 560 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 WNT9AO14904 365 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 SLC7A4O43246 635 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 TRUB2O95900 331 aaKnown RBP17.73■□□□□ 0.43
SMG9-210ENST00000600097 CALCAP01258 141 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 YWHAZP63104 245 aaKnown RBP17.73■□□□□ 0.43
SMG9-210ENST00000600097 OVGP1Q12889 678 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 ILKQ13418 452 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 TTC39BQ5VTQ0 682 aaPredicted RBP17.73■□□□□ 0.43
SMG9-210ENST00000600097 SFMBT2Q5VUG0 894 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.73■□□□□ 0.43
SMG9-210ENST00000600097 IQCHQ86VS3 1027 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 ARHGEF19Q8IW93 802 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 EHBP1Q8NDI1 1231 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 FAM131CQ96AQ9 280 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 MED15Q96RN5 788 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 SLC4A5Q9BY07 1137 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 NRSN2Q9GZP1 204 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 CNTN6Q9UQ52 1028 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 DMTF1Q9Y222 760 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 PLXNA2O75051 1894 aa17.73■□□□□ 0.43
SMG9-210ENST00000600097 KCNU1A8MYU2 1149 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 MED7O43513 233 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 IGLV3-25P01717 112 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 SLC2A3P11169 496 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 DRD3P35462 400 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 STK19P49842 368 aaPredicted RBP17.72■□□□□ 0.43
SMG9-210ENST00000600097 VASPP50552 380 aaPredicted RBP17.72■□□□□ 0.43
SMG9-210ENST00000600097 PLK1P53350 603 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 HES3Q5TGS1 186 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 FAM46CQ5VWP2 391 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 FOXR2Q6PJQ5 311 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 LRRC69Q6ZNQ3 347 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 TMEM110Q86TL2 294 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 CCAR2Q8N163 923 aaKnown RBP17.72■□□□□ 0.43
SMG9-210ENST00000600097 OR8D1Q8WZ84 308 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 ERCC4Q92889 916 aaPredicted RBP17.72■□□□□ 0.43
SMG9-210ENST00000600097 TIGD1Q96MW7 591 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 UBL7Q96S82 380 aaPredicted RBP17.72■□□□□ 0.43
SMG9-210ENST00000600097 THAP9Q9H5L6 903 aa17.72■□□□□ 0.43
SMG9-210ENST00000600097 A0A1B0GVM2 712 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 TCAF2A6NFQ2 919 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 KRT5P13647 590 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 PDGFRAP16234 1089 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 CKMT2P17540 419 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 EIF2S3P41091 472 aaKnown RBP17.71■□□□□ 0.43
SMG9-210ENST00000600097 PPP2CBP62714 309 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 PPP2CAP67775 309 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms