RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 SEMA4AQ9H3S1 761 aa15.65■□□□□ 0.1
LIG1-219ENST00000600055 MTG2Q9H4K7 406 aa15.65■□□□□ 0.1
LIG1-219ENST00000600055 MRPL47Q9HD33 250 aaKnown RBP15.65■□□□□ 0.1
LIG1-219ENST00000600055 SPTLC3Q9NUV7 552 aa15.65■□□□□ 0.1
LIG1-219ENST00000600055 ZNF212Q9UDV6 495 aa15.65■□□□□ 0.1
LIG1-219ENST00000600055 PCSK1NQ9UHG2 260 aa15.65■□□□□ 0.1
LIG1-219ENST00000600055 ERVW-1Q9UQF0 538 aa15.65■□□□□ 0.1
LIG1-219ENST00000600055 TBC1D30Q9Y2I9 924 aa15.65■□□□□ 0.1
LIG1-219ENST00000600055 OR51B4Q9Y5P0 310 aa15.65■□□□□ 0.1
LIG1-219ENST00000600055 AKR1B10O60218 316 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 SYNCRIPO60506 623 aaKnown RBP15.64■□□□□ 0.09
LIG1-219ENST00000600055 RPP40O75818 363 aaKnown RBP15.64■□□□□ 0.09
LIG1-219ENST00000600055 LRIG2O94898 1065 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 ASLP04424 464 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 RHOCP08134 193 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 CNR2P34972 360 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 STK19P49842 368 aaPredicted RBP15.64■□□□□ 0.09
LIG1-219ENST00000600055 PLK1P53350 603 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 ECT2LQ008S8 904 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 NRG1Q02297 640 aaPredicted RBP15.64■□□□□ 0.09
LIG1-219ENST00000600055 SLC12A1Q13621 1099 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 RWDD4Q6NW29 188 aaKnown RBP15.64■□□□□ 0.09
LIG1-219ENST00000600055 CEP68Q76N32 757 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 RPL10LQ96L21 214 aaKnown RBP15.64■□□□□ 0.09
LIG1-219ENST00000600055 CCDC42Q96M95 316 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 PPARGC1AQ9UBK2 798 aaKnown RBP15.64■□□□□ 0.09
LIG1-219ENST00000600055 SLCO3A1Q9UIG8 710 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 SMG5Q9UPR3 1016 aaKnown RBP15.64■□□□□ 0.09
LIG1-219ENST00000600055 NEU3Q9UQ49 428 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 VPS13AQ96RL7 3174 aa15.64■□□□□ 0.09
LIG1-219ENST00000600055 MYO18AQ92614 2054 aaKnown RBP15.63■□□□□ 0.09
LIG1-219ENST00000600055 A0A0D9SEW6 157 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 TTC34A8MYJ7 566 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 GFRA3O60609 400 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 DESP17661 470 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 BCKDHBP21953 392 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 MIPP30301 263 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 OR1E1P30953 314 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 OXCT1P55809 520 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 STARD3Q14849 445 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 E2F5Q15329 346 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 CA9Q16790 459 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 EFHC2Q5JST6 749 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 CYP4V2Q6ZWL3 525 aaPredicted RBP15.63■□□□□ 0.09
LIG1-219ENST00000600055 KBTBD6Q86V97 674 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 FAM160A2Q8N612 972 aaPredicted RBP15.63■□□□□ 0.09
LIG1-219ENST00000600055 TBC1D31Q96DN5 1066 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 MRGPRX1Q96LB2 322 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 PSMB7Q99436 277 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 MKRN2Q9H000 416 aaKnown RBP15.63■□□□□ 0.09
LIG1-219ENST00000600055 MUC3BQ9H195 1237 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 CD93Q9NPY3 652 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 NDFIP2Q9NV92 336 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 ANAPC7Q9UJX3 599 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 VPS28Q9UK41 221 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 FANCMQ8IYD8 2048 aa15.63■□□□□ 0.09
LIG1-219ENST00000600055 MUC22E2RYF6 1773 aaPredicted RBP15.62■□□□□ 0.09
LIG1-219ENST00000600055 CREB3O43889 395 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 SNAP91O60641 907 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 LRCH4O75427 683 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 RNF8O76064 485 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 SRPRAP08240 638 aaKnown RBP15.62■□□□□ 0.09
LIG1-219ENST00000600055 TCF4P15884 667 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 L1CAMP32004 1257 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 COPAP53621 1224 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 ST8SIA6P61647 398 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 MAP7D1Q3KQU3 841 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 USP39Q53GS9 565 aaKnown RBP15.62■□□□□ 0.09
LIG1-219ENST00000600055 KIAA1324Q6UXG2 1013 aaKnown RBP15.62■□□□□ 0.09
LIG1-219ENST00000600055 SETD3Q86TU7 594 aaPredicted RBP15.62■□□□□ 0.09
LIG1-219ENST00000600055 NLRP14Q86W24 1093 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 CACUL1Q86Y37 369 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 OR7D4Q8NG98 312 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 SNRNP25Q9BV90 132 aaKnown RBP15.62■□□□□ 0.09
LIG1-219ENST00000600055 PRSS16Q9NQE7 514 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 AP4E1Q9UPM8 1137 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 MYO15AQ9UKN7 3530 aa15.62■□□□□ 0.09
LIG1-219ENST00000600055 ZBTB24O43167 697 aaPredicted RBP15.61■□□□□ 0.09
LIG1-219ENST00000600055 H2AFZP0C0S5 128 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 RHOQP17081 205 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 GLDCP23378 1020 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 IL1R2P27930 398 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 P2RY2P41231 377 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 AIF1P55008 147 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 SEMA3BQ13214 749 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 CAMK2GQ13555 558 aaPredicted RBP15.61■□□□□ 0.09
LIG1-219ENST00000600055 C6orf118Q5T5N4 469 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 ERMARDQ5T6L9 678 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 H2AFVQ71UI9 128 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 CPNE8Q86YQ8 564 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 TMPRSS6Q8IU80 811 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 ZNF564Q8TBZ8 553 aaPredicted RBP15.61■□□□□ 0.09
LIG1-219ENST00000600055 KCTD15Q96SI1 283 aaPredicted RBP15.61■□□□□ 0.09
LIG1-219ENST00000600055 DHX35Q9H5Z1 703 aaKnown RBP15.61■□□□□ 0.09
LIG1-219ENST00000600055 CTTNBP2NLQ9P2B4 639 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 SUN2Q9UH99 717 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 DNAI1Q9UI46 699 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 MBD1Q9UIS9 605 aaPredicted RBP15.61■□□□□ 0.09
LIG1-219ENST00000600055 USP18Q9UMW8 372 aa15.61■□□□□ 0.09
LIG1-219ENST00000600055 DMDP11532 3685 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms