RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 CCDC117Q8IWD4 279 aaPredicted RBP13.45□□□□□ -0.26
LIG1-212ENST00000596549 DEFB124Q8NES8 71 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 CPA5Q8WXQ8 436 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 PTPRN2Q92932 1015 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 TKTL2Q9H0I9 626 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 PABPC3Q9H361 631 aaKnown RBP13.45□□□□□ -0.26
LIG1-212ENST00000596549 SUSD2Q9UGT4 822 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 SUN2Q9UH99 717 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 SLC12A6Q9UHW9 1150 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 EIF2B4Q9UI10 523 aaKnown RBP13.45□□□□□ -0.26
LIG1-212ENST00000596549 SLCO3A1Q9UIG8 710 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.45□□□□□ -0.26
LIG1-212ENST00000596549 OR51B4Q9Y5P0 310 aa13.45□□□□□ -0.26
LIG1-212ENST00000596549 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 A0A1B0GTW7 788 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 C10orf142B7Z368 130 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 GOLGA6L22H0YM25 854 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 MID1O15344 667 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 CNTN5O94779 1100 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 MOCS3O95396 460 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 SEMA4FO95754 770 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 ATP1A3P13637 1013 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 PLK1P53350 603 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 DEUP1Q05D60 604 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 TYRO3Q06418 890 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 SLC12A1Q13621 1099 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 CST6Q15828 149 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 SLC25A52Q3SY17 297 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 TTC31Q49AM3 519 aaPredicted RBP13.44□□□□□ -0.26
LIG1-212ENST00000596549 RAB6CQ53S08 254 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 FKBP15Q5T1M5 1219 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 PIP4P1Q86T03 277 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 ZNF677Q86XU0 584 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 AADATQ8N5Z0 425 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 AOPEPQ8N6M6 819 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 EMC1Q8N766 993 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 FRS2Q8WU20 508 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 FAM129BQ96TA1 746 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 C11orf70Q9BRQ4 267 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 ORAI3Q9BRQ5 295 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 BTBD1Q9H0C5 482 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 RAB6CQ9H0N0 254 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 MIR1-1HGQ9H1L0 117 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 PCED1AQ9H1Q7 454 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 DNAAF2Q9NVR5 837 aaKnown RBP13.44□□□□□ -0.26
LIG1-212ENST00000596549 RRN3Q9NYV6 651 aa13.44□□□□□ -0.26
LIG1-212ENST00000596549 CNOT1A5YKK6 2376 aaKnown RBP13.44□□□□□ -0.26
LIG1-212ENST00000596549 EDDM13A0A1B0GTR0 161 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 A0A1W2PP55 124 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 TARSL2A2RTX5 802 aaKnown RBP13.43□□□□□ -0.26
LIG1-212ENST00000596549 GJB6O95452 261 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 IGHV4-34P06331 123 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 TPM2P07951 284 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 UNGP13051 313 aaPredicted RBP13.43□□□□□ -0.26
LIG1-212ENST00000596549 CEACAM1P13688 526 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 CD59P13987 128 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 GNSP15586 552 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 MMP8P22894 467 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 RDXP35241 583 aaKnown RBP13.43□□□□□ -0.26
LIG1-212ENST00000596549 PSMD8P48556 350 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 METAP1P53582 386 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 ATXN3P54252 364 aaPredicted RBP13.43□□□□□ -0.26
LIG1-212ENST00000596549 PTP4A2Q12974 167 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 MTA1Q13330 715 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 LAYNQ6UX15 382 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 USP30Q70CQ3 517 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 FAM131BQ86XD5 332 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 MMAAQ8IVH4 418 aaKnown RBP13.43□□□□□ -0.26
LIG1-212ENST00000596549 STK40Q8N2I9 435 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 JOSD2Q8TAC2 188 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 SNX19Q92543 992 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 BIRC7Q96CA5 298 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 SPAG5Q96R06 1193 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 ERGIC2Q96RQ1 377 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 PCDHB18PQ96TA0 734 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 PSMB7Q99436 277 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 SIK2Q9H0K1 926 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 WDCPQ9H6R7 721 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 WASF3Q9UPY6 502 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 TBC1D30Q9Y2I9 924 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 DAAM1Q9Y4D1 1078 aa13.43□□□□□ -0.26
LIG1-212ENST00000596549 IGLV3-10A0A075B6K4 115 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 UPK3BL1B0FP48 263 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 UPK3BL2E5RIL1 263 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 BCAT2O15382 392 aaPredicted RBP13.42□□□□□ -0.26
LIG1-212ENST00000596549 OPHN1O60890 802 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 CLDN11O75508 207 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 TOP3BO95985 862 aaKnown RBP13.42□□□□□ -0.26
LIG1-212ENST00000596549 SYPP08247 313 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 DRD3P35462 400 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 STAT1P42224 750 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 CDH4P55283 916 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 GSCP56915 257 aaPredicted RBP13.42□□□□□ -0.26
LIG1-212ENST00000596549 SHC2P98077 582 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 RNF219Q5W0B1 726 aaPredicted RBP13.42□□□□□ -0.26
LIG1-212ENST00000596549 ARCQ7LC44 396 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 PHLDB2Q86SQ0 1253 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 MSANTD4Q8NCY6 345 aa13.42□□□□□ -0.26
LIG1-212ENST00000596549 SLC30A5Q8TAD4 765 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms