RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 KIAA0907Q7Z7F0 614 aaPredicted RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 LONP2Q86WA8 852 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 FAM72BQ86X60 149 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 CAMKK1Q8N5S9 505 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 GPR161Q8N6U8 529 aaKnown RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.41□□□□□ -0.58
LIG1-211ENST00000596457 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 CTNNBL1Q8WYA6 563 aaPredicted RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 RUBCNQ92622 972 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 RPL10LQ96L21 214 aaKnown RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 ZYG11BQ9C0D3 744 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 INTS6Q9UL03 887 aaKnown RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 FZD10Q9ULW2 581 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 EML5Q05BV3 1969 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 DOCK4Q8N1I0 1966 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 MYO18AQ92614 2054 aaKnown RBP11.4□□□□□ -0.58
LIG1-211ENST00000596457 MAP1BP46821 2468 aaKnown RBP11.4□□□□□ -0.58
LIG1-211ENST00000596457 DRGXA6NNA5 263 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 AXIN1O15169 862 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 PRPSAP2O60256 369 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 SYNCRIPO60506 623 aaKnown RBP11.4□□□□□ -0.58
LIG1-211ENST00000596457 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
LIG1-211ENST00000596457 PRKCHP24723 683 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 OR1E1P30953 314 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 CNR2P34972 360 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 GJC1P36383 396 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 ST8SIA6P61647 398 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 STARD3Q14849 445 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 E2F5Q15329 346 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 LPAL2Q16609 132 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 PLEKHG6Q3KR16 790 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 ACBD5Q5T8D3 534 aaPredicted RBP11.4□□□□□ -0.58
LIG1-211ENST00000596457 RNF43Q68DV7 783 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 KIAA1211LQ6NV74 962 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 CEP68Q76N32 757 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 WDR5BQ86VZ2 330 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 ZNF683Q8IZ20 524 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 OR52K2Q8NGK3 314 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 ZNF564Q8TBZ8 553 aaPredicted RBP11.4□□□□□ -0.58
LIG1-211ENST00000596457 TBC1D31Q96DN5 1066 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 LMLNQ96KR4 655 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 SPON2Q9BUD6 331 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 OSBPL2Q9H1P3 480 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 SLC6A17Q9H1V8 727 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 MTG2Q9H4K7 406 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 DHX35Q9H5Z1 703 aaKnown RBP11.4□□□□□ -0.58
LIG1-211ENST00000596457 ZWILCHQ9H900 591 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 DNAI1Q9UI46 699 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 VPS28Q9UK41 221 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 AP4E1Q9UPM8 1137 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 ERVW-1Q9UQF0 538 aa11.4□□□□□ -0.58
LIG1-211ENST00000596457 MYO1FO00160 1098 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 HRO43593 1189 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 LRIG2O94898 1065 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 ASLP04424 464 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 DLDP09622 509 aaKnown RBP11.39□□□□□ -0.59
LIG1-211ENST00000596457 MIPP30301 263 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 HOXA6P31267 233 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 MAGEA1P43355 309 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 STK19P49842 368 aaPredicted RBP11.39□□□□□ -0.59
LIG1-211ENST00000596457 OXCT1P55809 520 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 ECT2LQ008S8 904 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 SLC12A1Q13621 1099 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 CA9Q16790 459 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 ST3GAL2Q16842 350 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 C5orf22Q49AR2 442 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 ACCSLQ4AC99 568 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 ERMARDQ5T6L9 678 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 CXorf57Q6NSI4 855 aaKnown RBP11.39□□□□□ -0.59
LIG1-211ENST00000596457 KIAA1324Q6UXG2 1013 aaKnown RBP11.39□□□□□ -0.59
LIG1-211ENST00000596457 ZNF354CQ86Y25 554 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 CACUL1Q86Y37 369 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 ARFGAP1Q8N6T3 406 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 SUMF1Q8NBK3 374 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 MDGA1Q8NFP4 955 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 OR7D4Q8NG98 312 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 RLN3Q8WXF3 142 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 HSPH1Q92598 858 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 NTAN1Q96AB6 310 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 TTC17Q96AE7 1141 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 RMDN1Q96DB5 314 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 PEBP4Q96S96 227 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 GABRG3Q99928 467 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 SNRNP25Q9BV90 132 aaKnown RBP11.39□□□□□ -0.59
LIG1-211ENST00000596457 EPC1Q9H2F5 836 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 PPARGC1AQ9UBK2 798 aaKnown RBP11.39□□□□□ -0.59
LIG1-211ENST00000596457 IP6K2Q9UHH9 426 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 SLC25A13Q9UJS0 675 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 NENFQ9UMX5 172 aa11.39□□□□□ -0.59
LIG1-211ENST00000596457 ZNF292O60281 2723 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 IGLV3-10A0A075B6K4 115 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 A0A1W2PQF6 199 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 TTC34A8MYJ7 566 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 GOLGA6L6A8MZA4 724 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 DCLK1O15075 740 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 NPC1O15118 1278 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 DAPK3O43293 454 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 BNIP3LO60238 219 aa11.38□□□□□ -0.59
LIG1-211ENST00000596457 LRCH4O75427 683 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms