RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CCDC78A2IDD5 438 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 PLIN3O60664 434 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 GLRA3O75311 464 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 WFS1O76024 890 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 F9P00740 461 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 JCHAINP01591 159 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 PGFP49763 221 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 RWDD4Q6NW29 188 aaKnown RBP23.21■■□□□ 1.31
SRRM1-222ENST00000596378 KCNV2Q8TDN2 545 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 EBF4Q9BQW3 602 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 ACBD6Q9BR61 282 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 BTBD10Q9BSF8 475 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 LRRC40Q9H9A6 602 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 NOP53Q9NZM5 478 aaKnown RBP23.21■■□□□ 1.31
SRRM1-222ENST00000596378 PPARGC1AQ9UBK2 798 aaKnown RBP23.21■■□□□ 1.31
SRRM1-222ENST00000596378 NCAM2O15394 837 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 CCDC22O60826 627 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 DIAPH2O60879 1101 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 ENTPD5O75356 428 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 FGF3P11487 239 aaPredicted RBP23.21■■□□□ 1.31
SRRM1-222ENST00000596378 TYK2P29597 1187 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 GP5P40197 560 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 PCLAFQ15004 111 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 PM20D1Q6GTS8 502 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 ATG14Q6ZNE5 492 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 TREML1Q86YW5 311 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.21■■□□□ 1.31
SRRM1-222ENST00000596378 ACMSDQ8TDX5 336 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 ZNF778Q96MU6 729 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 CASS4Q9NQ75 786 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 BFARQ9NZS9 450 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 TMEM216Q9P0N5 145 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 TTC3P53804 2025 aa23.21■■□□□ 1.31
SRRM1-222ENST00000596378 ZCWPW2A0A1B0GU75 182 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 ARHGAP42A6NI28 874 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 ASGR1P07306 291 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 METTL23Q86XA0 190 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 DCLK2Q8N568 766 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 SMC1BQ8NDV3 1235 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 NSMCE1Q8WV22 266 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 PKMYT1Q99640 499 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 ADAM2Q99965 735 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 DMAP1Q9NPF5 467 aaPredicted RBP23.2■■□□□ 1.3
SRRM1-222ENST00000596378 C15orf41Q9Y2V0 281 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 RAD54BQ9Y620 910 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 GOLGA8TH3BQL2 631 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 ESRRAP11474 423 aaPredicted RBP23.2■■□□□ 1.3
SRRM1-222ENST00000596378 MX2P20592 715 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 NAB1Q13506 487 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 HSP90AA5PQ58FG0 334 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 RGMBQ6NW40 437 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 OTOP3Q7RTS5 596 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 STRA8Q7Z7C7 330 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 SAPCD2Q86UD0 394 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 C10orf107Q8IVU9 208 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.2■■□□□ 1.39e-6■■■□□ 15.9
SRRM1-222ENST00000596378 RAB3IL1Q8TBN0 382 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 CHRAC1Q9NRG0 131 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 SNX15Q9NRS6 342 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 RRN3Q9NYV6 651 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 NUDT5Q9UKK9 219 aa23.2■■□□□ 1.3
SRRM1-222ENST00000596378 CALB2P22676 271 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 LPIN1Q14693 890 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 ANKRD20A4Q4UJ75 823 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 TMEM135Q86UB9 458 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 CPNE1Q99829 537 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 CAB39LQ9H9S4 337 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 THAP1Q9NVV9 213 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 H0Y3Z8 333 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 DFFAO00273 331 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 GYG2O15488 501 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 MSI1O43347 362 aaKnown RBP23.19■■□□□ 1.3
SRRM1-222ENST00000596378 HNRNPCL1O60812 293 aaKnown RBP23.19■■□□□ 1.3
SRRM1-222ENST00000596378 SERPINB6P35237 376 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 KRT72Q14CN4 511 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 OVOS1Q6IE37 1185 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 ZSCAN18Q8TBC5 510 aaPredicted RBP23.19■■□□□ 1.3
SRRM1-222ENST00000596378 RSPH1Q8WYR4 309 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 IRGQQ8WZA9 623 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 ATP2A3Q93084 1043 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 ZIC5Q96T25 663 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 SPC25Q9HBM1 224 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 TAS2R1Q9NYW7 299 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 DCDC2Q9UHG0 476 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 SFMBT1Q9UHJ3 866 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 NEU3Q9UQ49 428 aa23.19■■□□□ 1.3
SRRM1-222ENST00000596378 GSC2O15499 205 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 PROCP04070 461 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 ENO1P06733 434 aaKnown RBP23.18■■□□□ 1.3
SRRM1-222ENST00000596378 OR4Q2P0C623 313 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 ALDH18A1P54886 795 aaKnown RBP23.18■■□□□ 1.3
SRRM1-222ENST00000596378 DLG2Q15700 870 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 TEDDM1Q5T9Z0 273 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 PLD6Q8N2A8 252 aaKnown RBP23.18■■□□□ 1.3
SRRM1-222ENST00000596378 CNTD1Q8N815 330 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 FBXO27Q8NI29 283 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 TEKT5Q96M29 485 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 NUDCD1Q96RS6 583 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 RBBP8Q99708 897 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 WWP1Q9H0M0 922 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms