RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 TXNRD3NBQ6F5E7 133 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 SDE2Q6IQ49 451 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 SERPINA13PQ6UXR4 307 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 LONP2Q86WA8 852 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 CAMKK1Q8N5S9 505 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 HMGB4Q8WW32 186 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 MRGPRX3Q96LB0 322 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 PANX2Q96RD6 677 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 FEM1AQ9BSK4 669 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 MUC3BQ9H195 1237 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 IRF2BPLQ9H1B7 796 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 DHX35Q9H5Z1 703 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 PPARGC1AQ9UBK2 798 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 ERVW-1Q9UQF0 538 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 INVSQ9Y283 1065 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 OR51B4Q9Y5P0 310 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 TMEM110-MUSTN1A8MSY1 372 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 AXIN1O15169 862 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 HRO43593 1189 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 PRPSAP2O60256 369 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 SNAP91O60641 907 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 LILRB5O75023 590 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 MOCS3O95396 460 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 ATP5BP06576 529 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 EPHX1P07099 455 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 DLDP09622 509 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 GABRG2P18507 467 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 FECHP22830 423 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 GLDCP23378 1020 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 OR1E1P30953 314 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 HOXA6P31267 233 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 L1CAMP32004 1257 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 NBL1P41271 181 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 NRLP54845 237 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 SEMA3BQ13214 749 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 SMTNL2Q2TAL5 461 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 KCNT1Q5JUK3 1230 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 ACBD5Q5T8D3 534 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 WDR5BQ86VZ2 330 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 NLRP14Q86W24 1093 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 RASSF3Q86WH2 238 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 CACUL1Q86Y37 369 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 ABCA7Q8IZY2 2146 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 OR7D4Q8NG98 312 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 ATRIPQ8WXE1 791 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 TBC1D31Q96DN5 1066 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 RPL10LQ96L21 214 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 KCTD15Q96SI1 283 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 PSMB7Q99436 277 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 FAM126AQ9BYI3 521 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 TMEM245Q9H330 911 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 ZWILCHQ9H900 591 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 POLMQ9NP87 494 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 BCCIPQ9P287 314 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 IP6K2Q9UHH9 426 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 DNAI1Q9UI46 699 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 SLCO3A1Q9UIG8 710 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 VPS28Q9UK41 221 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 USP18Q9UMW8 372 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 PCDHGA2Q9Y5H1 932 aa14.16□□□□□ -0.14
SHKBP1-207ENST00000595631 MYO1FO00160 1098 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 DCLK1O15075 740 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 RHOQP17081 205 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 NDUFV2P19404 249 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 MAGEA1P43355 309 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 PLK1P53350 603 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 AIF1P55008 147 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 SLC12A1Q13621 1099 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 PIGHQ14442 188 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 ERMARDQ5T6L9 678 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 ZC3H14Q6PJT7 736 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 RAD9BQ6WBX8 426 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 TMEM139Q8IV31 216 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 PGBD3Q8N328 593 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 NIPA2Q8N8Q9 360 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 SLC35G2Q8TBE7 412 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 HSPH1Q92598 858 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 CD93Q9NPY3 652 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 UVRAGQ9P2Y5 699 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 EBF1Q9UH73 591 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 PLA2G4CQ9UP65 541 aa14.15□□□□□ -0.14
SHKBP1-207ENST00000595631 ANKRD36A6QL64 1941 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 TTC34A8MYJ7 566 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 EEF2KO00418 725 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 NPC1O15118 1278 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 ALDH1A2O94788 518 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 LCA5LO95447 670 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 ASLP04424 464 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 VAV1P15498 845 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 GOT1P17174 413 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 EPHB2P29323 1055 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 PCK1P35558 622 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 GJC1P36383 396 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 ACVRL1P37023 503 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 SSR1P43307 286 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 OXCT1P55809 520 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 TAS2R40P59535 323 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 TPI1P60174 286 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 ECT2LQ008S8 904 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 SLC25A11Q02978 314 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms