RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 GLUD2P49448 558 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 BTKQ06187 659 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 DLG1Q12959 904 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 USP4Q13107 963 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 NME3Q13232 169 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 LSAMPQ13449 338 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 NAB1Q13506 487 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 HIPK4Q8NE63 616 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 ZNF669Q96BR6 464 aaPredicted RBP16.88■□□□□ 0.29
LIG1-206ENST00000594067 HSFY1Q96LI6 401 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 GOLGA2P5Q9HBQ8 144 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 KPNA7A9QM74 516 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 PEX2P28328 305 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 GARSP41250 739 aaKnown RBP16.88■□□□□ 0.29
LIG1-206ENST00000594067 PDK1Q15118 436 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 INSCQ1MX18 579 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 ANKRD13AQ8IZ07 590 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 PHTF2Q8N3S3 785 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 OSMRQ99650 979 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 FERMT1Q9BQL6 677 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 NAT9Q9BTE0 207 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 MAN1C1Q9NR34 630 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 M0QYT0 321 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 CLDN5O00501 218 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 MX2P20592 715 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 NDUFV1P49821 464 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 B4GALNT2Q8NHY0 566 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 ACTRT2Q8TDY3 377 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 GDPD5Q8WTR4 605 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 AGAP2Q99490 1192 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 OCEL1Q9H607 264 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 CAB39LQ9H9S4 337 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 KLHL8Q9P2G9 620 aaPredicted RBP16.87■□□□□ 0.29
LIG1-206ENST00000594067 RCOR3Q9P2K3 495 aaPredicted RBP16.87■□□□□ 0.29
LIG1-206ENST00000594067 CDH22Q9UJ99 828 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 KCNH4Q9UQ05 1017 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 HARS2P49590 506 aaKnown RBP16.87■□□□□ 0.29
LIG1-206ENST00000594067 DLG2Q15700 870 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 GRTP1Q5TC63 336 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 STRA8Q7Z7C7 330 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 AGR3Q8TD06 166 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 CPNE1Q99829 537 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 ADAMTS10Q9H324 1103 aa16.87■□□□□ 0.29
LIG1-206ENST00000594067 UBQLN1Q9UMX0 589 aaKnown RBP16.87■□□□□ 0.29
LIG1-206ENST00000594067 EEF2KO00418 725 aaKnown RBP16.86■□□□□ 0.29
LIG1-206ENST00000594067 DCXO43602 365 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 BEST1O76090 585 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 XIAPP98170 497 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 IRF9Q00978 393 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 SPANXN3Q5MJ09 141 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 SYPL2Q5VXT5 272 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 DEFB107AQ8IZN7 70 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 ZNF781Q8N8C0 355 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 NAT14Q8WUY8 206 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 OPTNQ96CV9 577 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 POMPQ9Y244 141 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 E9PBE3 544 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 FAM72CH0Y354 149 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 PIRO00625 290 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 KLHL41O60662 606 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 ALOX15P16050 662 aaPredicted RBP16.86■□□□□ 0.29
LIG1-206ENST00000594067 RABGGTBP53611 331 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 FAM72AQ5TYM5 149 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 FAM72DQ6L9T8 149 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 NAPRTQ6XQN6 538 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 FRMD7Q6ZUT3 714 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 FAM72BQ86X60 149 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 APPL2Q8NEU8 664 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 JADE3Q92613 823 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 RBBP8Q99708 897 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 IGSF9Q9P2J2 1179 aa16.86■□□□□ 0.29
LIG1-206ENST00000594067 XPO1O14980 1071 aaKnown RBP16.85■□□□□ 0.29
LIG1-206ENST00000594067 DAB1O75553 588 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 ITGAXP20702 1163 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
LIG1-206ENST00000594067 ZNF792Q3KQV3 632 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 SLC9B1Q4ZJI4 515 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 TCHHL1Q5QJ38 904 aaPredicted RBP16.85■□□□□ 0.29
LIG1-206ENST00000594067 FSTL4Q6MZW2 842 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 NOTUMQ6P988 496 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 ALKAL1Q6UXT8 129 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 HFE2Q6ZVN8 426 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 HPS6Q86YV9 775 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 DNAAF3Q8N9W5 541 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 ADAM32Q8TC27 787 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 CMTM5Q96DZ9 223 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 MOCOSQ96EN8 888 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 FAM96AQ9H5X1 160 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 LRRC40Q9H9A6 602 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 COG4Q9H9E3 785 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 ACSS2Q9NR19 701 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 PIGVQ9NUD9 493 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 SMIM28A0A1B0GU29 152 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 ZBTB14O43829 449 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 HSPA4LO95757 839 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 SPATA31D3P0C874 917 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 SPRP35270 261 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms