RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TIE1P35590 1138 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 CXCL12P48061 93 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 GEN1Q17RS7 908 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 C5orf22Q49AR2 442 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 CCDC185Q8N715 623 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.19■□□□□ 0.82
LSM4-203ENST00000593829 ACDQ96AP0 544 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 PACSIN1Q9BY11 444 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 ABCB8Q9NUT2 735 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 GGA2Q9UJY4 613 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 SNX10Q9Y5X0 201 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 A0A1B0GVM2 712 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 ANTXRLA6NF34 631 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 TCAF2A6NFQ2 919 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 H0Y626 953 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 RNF8O76064 485 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 TNNT3P45378 269 aaPredicted RBP20.19■□□□□ 0.82
LSM4-203ENST00000593829 ZNF252P-AS1Q0IIN9 211 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 HSF5Q4G112 596 aaPredicted RBP20.19■□□□□ 0.82
LSM4-203ENST00000593829 SLFN11Q7Z7L1 901 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 MMGT1Q8N4V1 131 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 ZNF513Q8N8E2 541 aaPredicted RBP20.19■□□□□ 0.82
LSM4-203ENST00000593829 PRSS33Q8NF86 280 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 WFDC5Q8TCV5 224 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 WFIKKN2Q8TEU8 576 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 OSBPL2Q9H1P3 480 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 TMEM253P0C7T8 217 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 CHRM1P11229 460 aaPredicted RBP20.18■□□□□ 0.82
LSM4-203ENST00000593829 PABPC1P11940 636 aaKnown RBP20.18■□□□□ 0.82
LSM4-203ENST00000593829 COL9A1P20849 921 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 AIF1P55008 147 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 SATB1Q01826 763 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 SCAPQ12770 1279 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 EIF4HQ15056 248 aaKnown RBP20.18■□□□□ 0.82
LSM4-203ENST00000593829 KIAA0907Q7Z7F0 614 aaPredicted RBP20.18■□□□□ 0.82
LSM4-203ENST00000593829 KIAA1328Q86T90 577 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 CIR1Q86X95 450 aaPredicted RBP20.18■□□□□ 0.82
LSM4-203ENST00000593829 ZNF683Q8IZ20 524 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 MAML2Q8IZL2 1156 aaPredicted RBP20.18■□□□□ 0.82
LSM4-203ENST00000593829 IL17RCQ8NAC3 791 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 NCAPGQ9BPX3 1015 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 PRMT8Q9NR22 394 aaPredicted RBP20.18■□□□□ 0.82
LSM4-203ENST00000593829 OR12D3Q9UGF7 316 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 FBXO4Q9UKT5 387 aa20.18■□□□□ 0.82
LSM4-203ENST00000593829 E9PAM4 449 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 TIMM44O43615 452 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 SRGAP2O75044 1071 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 IPO7O95373 1038 aaKnown RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 CD70P32970 193 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 ACAP1Q15027 740 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 FOXR1Q6PIV2 292 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 CHST9Q7L1S5 443 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 SYT13Q7L8C5 426 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 TRMT11Q7Z4G4 463 aaKnown RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 AHI1Q8N157 1196 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 ALLCQ8N6M5 410 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 UCMAQ8WVF2 138 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 C2orf42Q9NWW7 574 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 ELOVL2Q9NXB9 296 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 KIAA1522Q9P206 1035 aaPredicted RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 CTTNBP2NLQ9P2B4 639 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 UVRAGQ9P2Y5 699 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 ANAPC7Q9UJX3 599 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 IGLV3-10A0A075B6K4 115 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 DRGXA6NNA5 263 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 VGLL3A8MV65 326 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 CLDN11O75508 207 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 PAPSS2O95340 614 aaPredicted RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 KLF8O95600 359 aaPredicted RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 IRAK1P51617 712 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 CDH4P55283 916 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 NRG1Q02297 640 aaPredicted RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 CSTF1Q05048 431 aaKnown RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 LMAN2Q12907 356 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 PIGHQ14442 188 aaPredicted RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 E2F5Q15329 346 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 FSCBQ5H9T9 825 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 EFHC2Q5JST6 749 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 CCDC70Q6NSX1 233 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 CCDC33Q8N5R6 958 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 TXNDC5Q8NBS9 432 aaKnown RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 AENQ8WTP8 325 aaKnown RBP20.17■□□□□ 0.82
LSM4-203ENST00000593829 LMLNQ96KR4 655 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 CIPCQ9C0C6 399 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 IP6K2Q9UHH9 426 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 HCN2Q9UL51 889 aa20.17■□□□□ 0.82
LSM4-203ENST00000593829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.16■□□□□ 0.82
LSM4-203ENST00000593829 MYO1FO00160 1098 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 ENC1O14682 589 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 VAV2P52735 878 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 TCF15Q12870 199 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 ZNF177Q13360 481 aaPredicted RBP20.16■□□□□ 0.82
LSM4-203ENST00000593829 EGFLAMQ63HQ2 1017 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 TMEM215Q68D42 235 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 ARFGAP1Q8N6T3 406 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 ZNF564Q8TBZ8 553 aaPredicted RBP20.16■□□□□ 0.82
LSM4-203ENST00000593829 FZD10Q9ULW2 581 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 MMP17Q9ULZ9 603 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 SLC8A2Q9UPR5 921 aa20.16■□□□□ 0.82
LSM4-203ENST00000593829 AGPSO00116 658 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms