RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 IGF2RP11717 2491 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 NUP210Q8TEM1 1887 aaPredicted RBP12.27□□□□□ -0.44
DDX39A-219ENST00000592927 WDFY3Q8IZQ1 3526 aa12.27□□□□□ -0.44
DDX39A-219ENST00000592927 CYSRT1A8MQ03 144 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 CCDC188H7C350 402 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 ENDOD1O94919 500 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 ZRANB2O95218 330 aaKnown RBP eCLIP12.27□□□□□ -0.453e-7■■■■□ 25.7
DDX39A-219ENST00000592927 LATS1O95835 1130 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 MOCS2O96007 188 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-219ENST00000592927 CXCL12P48061 93 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 MARCKSL1P49006 195 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 CXCR3P49682 368 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 TAS2R40P59535 323 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 SLC25A11Q02978 314 aaKnown RBP12.27□□□□□ -0.45
DDX39A-219ENST00000592927 MTA1Q13330 715 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 PPP2R5EQ16537 467 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 ODF2Q5BJF6 829 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 BRMS1LQ5PSV4 323 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 SH3PXD2AQ5TCZ1 1133 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 DCAF12L1Q5VU92 463 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 TRIM68Q6AZZ1 485 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 Q6ZNB5 142 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 CEP68Q76N32 757 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 BNIPLQ7Z465 357 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 CPNE8Q86YQ8 564 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 RCOR2Q8IZ40 523 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 ZNF687Q8N1G0 1237 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 ATP6V0D2Q8N8Y2 350 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 SPATA4Q8NEY3 305 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 CSGALNACT1Q8TDX6 532 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 ATP2A3Q93084 1043 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 AZIN2Q96A70 460 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 MS4A14Q96JA4 679 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.45
DDX39A-219ENST00000592927 EBF3Q9H4W6 596 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 WDCPQ9H6R7 721 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 LMAN1LQ9HAT1 526 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 CALCOCO1Q9P1Z2 691 aa12.27□□□□□ -0.45
DDX39A-219ENST00000592927 UQCRHLA0A096LP55 91 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 KCNU1A8MYU2 1149 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 PDE2AO00408 941 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-219ENST00000592927 PRPSAP2O60256 369 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 ACSL4O60488 711 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 NFATC1O95644 943 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 UQCRHP07919 91 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 PYGMP11217 842 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 ARSAP15289 507 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 MIPP30301 263 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 PTPN7P35236 360 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 CHKAP35790 457 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 TNK2Q07912 1038 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 NR1H3Q13133 447 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 RUNX3Q13761 415 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 EML3Q32P44 896 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 BOLA3Q53S33 107 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 HEATR6Q6AI08 1181 aaKnown RBP12.26□□□□□ -0.45
DDX39A-219ENST00000592927 CCDC70Q6NSX1 233 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 C19orf48Q6RUI8 117 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 LONP2Q86WA8 852 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 FAM131BQ86XD5 332 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 ADGRG2Q8IZP9 1017 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 CPA6Q8N4T0 437 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 MMGT1Q8N4V1 131 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 TEKT4Q8WW24 435 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 UBXN4Q92575 508 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 DNASE1L2Q92874 299 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 BTN2A3PQ96KV6 586 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 TKTL2Q9H0I9 626 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 TRPV5Q9NQA5 729 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 EFR3BQ9Y2G0 817 aa12.26□□□□□ -0.45
DDX39A-219ENST00000592927 DSPP15924 2871 aaKnown RBP12.26□□□□□ -0.45
DDX39A-219ENST00000592927 GOLGA6L10A0A0M3HER8 536 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 ARNTLO00327 626 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 ADH1CP00326 375 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 FGGP02679 453 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 AIF1P55008 147 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 HDAC4P56524 1084 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 LONRF2Q1L5Z9 754 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 ITPRIPL2Q3MIP1 535 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 ARL13BQ3SXY8 428 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 GLE1Q53GS7 698 aaKnown RBP12.25□□□□□ -0.45
DDX39A-219ENST00000592927 RAB6CQ53S08 254 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 ADGRF1Q5T601 910 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 RNF43Q68DV7 783 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 SCYL2Q6P3W7 929 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 SLC13A5Q86YT5 568 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-219ENST00000592927 PSTKQ8IV42 348 aaKnown RBP12.25□□□□□ -0.45
DDX39A-219ENST00000592927 ARFGAP1Q8N6T3 406 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 TTC8Q8TAM2 541 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 IER2Q9BTL4 223 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 RAB6CQ9H0N0 254 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 SMOC1Q9H4F8 434 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 ECT2Q9H8V3 914 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 HPS4Q9NQG7 708 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 ARHGEF38Q9NXL2 777 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 GTSE1Q9NYZ3 720 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 STOML2Q9UJZ1 356 aa12.25□□□□□ -0.45
DDX39A-219ENST00000592927 SMG1Q96Q15 3661 aaKnown RBP12.25□□□□□ -0.45
DDX39A-219ENST00000592927 KRIT1O00522 736 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms