RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 P3H4Q92791 437 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 OSBPL9Q96SU4 736 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 FRMD8P1Q9BZ68 369 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-214ENST00000592186 MAGEH1Q9H213 219 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 HOMER3Q9NSC5 361 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 GTSE1Q9NYZ3 720 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 WNT16Q9UBV4 365 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 HPCAL4Q9UM19 191 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 DUSP12Q9UNI6 340 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 SLC27A6Q9Y2P4 619 aa10.96□□□□□ -0.65
SMAD4-214ENST00000592186 C5orf42Q9H799 3197 aa10.96□□□□□ -0.66
SMAD4-214ENST00000592186 BRWD1Q9NSI6 2320 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 MAN2B1O00754 1011 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 RAMP2O60895 175 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 TULP3O75386 442 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 RHOCP08134 193 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 KRT10P13645 584 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 MX2P20592 715 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 TGM2P21980 687 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 CXCR5P32302 372 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 DGKGP49619 791 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 SGSHP51688 502 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 ZNF211Q13398 564 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-214ENST00000592186 POLD3Q15054 466 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-214ENST00000592186 SLC44A4Q53GD3 710 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 DCAF12L1Q5VU92 463 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 KAZNQ674X7 775 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 TFAP2DQ7Z6R9 452 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 SLC13A5Q86YT5 568 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-214ENST00000592186 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMAD4-214ENST00000592186 ETFBKMTQ8IXQ9 262 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 RASGEF1CQ8N431 466 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 PQLC3Q8N755 202 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 PLD5Q8N7P1 536 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 ACTRT1Q8TDG2 376 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 BHMTQ93088 406 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 MYEOVQ96EZ4 313 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 SHDQ96IW2 340 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 PNKPQ96T60 521 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 FEM1AQ9BSK4 669 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 HEMGNQ9BXL5 484 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 BRD8Q9H0E9 1235 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 DNAJC17Q9NVM6 304 aaKnown RBP10.95□□□□□ -0.66
SMAD4-214ENST00000592186 PLK2Q9NYY3 685 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 ZNF212Q9UDV6 495 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 NEU3Q9UQ49 428 aa10.95□□□□□ -0.66
SMAD4-214ENST00000592186 COL6A3P12111 3177 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 HELZP42694 1942 aaKnown RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 A0A0A0MRY4 1105 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 ZSCAN5CA6NGD5 496 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 OTOL1A6NHN0 477 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 ARHGAP42A6NI28 874 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 SPECC1L-ADORA2AF8WAN1 911 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 APOC4-APOC2K7ER74 178 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 PGRMC1O00264 195 aaKnown RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 APOC2P02655 101 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 FGGP02679 453 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 GRIA2P42262 883 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 PAFAH1B1P43034 410 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 CLCN6P51797 869 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 GEMIN4P57678 1058 aaKnown RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 GNA12Q03113 381 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 PRKCQQ04759 706 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 SULT2A1Q06520 285 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 ZNF33AQ06730 810 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 SLC20A2Q08357 652 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 XRCC4Q13426 336 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 PDK1Q15118 436 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 LONRF2Q1L5Z9 754 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 RNF219Q5W0B1 726 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 AFMIDQ63HM1 303 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 NCBP2-AS2Q69YL0 99 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 GRAMD4Q6IC98 578 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 CXorf57Q6NSI4 855 aaKnown RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 KIAA0907Q7Z7F0 614 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 AHI1Q8N157 1196 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 NAT16Q8N8M0 369 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 KCNV2Q8TDN2 545 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 WFIKKN2Q8TEU8 576 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 ZNF592Q92610 1267 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 ACDQ96AP0 544 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 NELL2Q99435 816 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 PSMB7Q99436 277 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 P2RY13Q9BPV8 354 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 FERMT1Q9BQL6 677 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 C2orf49Q9BVC5 232 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-214ENST00000592186 MUC3BQ9H195 1237 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 LRRC19Q9H756 370 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 PIAS3Q9Y6X2 628 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 DOCK8Q8NF50 2099 aa10.94□□□□□ -0.66
SMAD4-214ENST00000592186 ATP5BP06576 529 aaKnown RBP10.93□□□□□ -0.66
SMAD4-214ENST00000592186 CISD3P0C7P0 127 aa10.93□□□□□ -0.66
SMAD4-214ENST00000592186 PABPC1P11940 636 aaKnown RBP10.93□□□□□ -0.66
SMAD4-214ENST00000592186 CTHP32929 405 aa10.93□□□□□ -0.66
SMAD4-214ENST00000592186 TNFRSF4P43489 277 aa10.93□□□□□ -0.66
SMAD4-214ENST00000592186 IRAK1P51617 712 aa10.93□□□□□ -0.66
SMAD4-214ENST00000592186 GRSF1Q12849 480 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMAD4-214ENST00000592186 KLF1Q13351 362 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-214ENST00000592186 EIF4HQ15056 248 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms