RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 E2F5Q15329 346 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 PTPRNQ16849 979 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 TRIM61Q5EBN2 209 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 PITRM1Q5JRX3 1037 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 PPP1R2P3Q6NXS1 205 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 DCUN1D2Q6PH85 259 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 METTL3Q86U44 580 aaKnown RBP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 CACUL1Q86Y37 369 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 TMPRSS6Q8IU80 811 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF366Q8N895 744 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 IQCDQ96DY2 449 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 TMEM245Q9H330 911 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 PRDM16Q9HAZ2 1276 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 ITM2CQ9NQX7 267 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 KIAA1522Q9P206 1035 aaPredicted RBP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 EVLQ9UI08 416 aaPredicted RBP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 CAPN11Q9UMQ6 739 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 PLA2G4CQ9UP65 541 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 ATXN2Q99700 1313 aaKnown RBP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 TPRP12270 2363 aaKnown RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 SIGLEC16A6NMB1 481 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 CCP110O43303 1012 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 DLDP09622 509 aaKnown RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 CASP14P31944 242 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 RPL7AP62424 266 aaKnown RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF177Q13360 481 aaPredicted RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 PEAR1Q5VY43 1037 aaPredicted RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 WDR59Q6PJI9 974 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 LRRC31Q6UY01 552 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 STRADAQ7RTN6 431 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 BNIPLQ7Z465 357 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF653Q96CK0 615 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 SIPA1Q96FS4 1042 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 TOE1Q96GM8 510 aaKnown RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF419Q96HQ0 510 aaPredicted RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 FSCN3Q9NQT6 498 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 TMEM51Q9NW97 253 aa14.34□□□□□ -0.11
CLIP3-205ENST00000592017 USP36Q9P275 1121 aaKnown RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 INTS6Q9UL03 887 aaKnown RBP14.34□□□□□ -0.11
CLIP3-205ENST00000592017 TCRBV5S1A1TA0A578 114 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 E9PAM4 449 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 SRGAP2O75044 1071 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 CNTN5O94779 1100 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 FTLP02792 175 aaPredicted RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 SERPING1P05155 500 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 PLEKP08567 350 aaPredicted RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 ADRB1P08588 477 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 DESP17661 470 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 KCNA4P22459 653 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 MZF1P28698 734 aaPredicted RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 CD6P30203 668 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 HOXD12P35452 270 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 CTSOP43234 321 aaPredicted RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 TPMTP51580 245 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 HDAC4P56524 1084 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 ST8SIA6P61647 398 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 CAMK2GQ13555 558 aaPredicted RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 PLEKHG6Q3KR16 790 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 ARL13BQ3SXY8 428 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 ALFQ53S48 1182 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 RNF219Q5W0B1 726 aaPredicted RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 HGSNATQ68CP4 663 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 SPECC1LQ69YQ0 1117 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 CXorf57Q6NSI4 855 aaKnown RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 SCYL2Q6P3W7 929 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 SLC23A3Q6PIS1 610 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 TFAP2DQ7Z6R9 452 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 APCDD1Q8J025 514 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 OR2T3Q8NH03 318 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 SYN2Q92777 582 aaPredicted RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 TTC17Q96AE7 1141 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 HSPA12BQ96MM6 686 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 TMEM9BQ9NQ34 198 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 WSB2Q9NYS7 404 aaPredicted RBP14.33□□□□□ -0.12
CLIP3-205ENST00000592017 MPP6Q9NZW5 540 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 MYO1AQ9UBC5 1043 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 ADAMTS1Q9UHI8 967 aa14.33□□□□□ -0.12
CLIP3-205ENST00000592017 ACACBO00763 2458 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 RTN2O75298 545 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 CLDN11O75508 207 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 ENDOD1O94919 500 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 IGLV3-19P01714 112 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 ASLP04424 464 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 RHOCP08134 193 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 TPM1P09493 284 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 C7P10643 843 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 ENGP17813 658 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 ZNF143P52747 638 aaPredicted RBP14.32□□□□□ -0.12
CLIP3-205ENST00000592017 CDH4P55283 916 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 TRIM14Q14142 442 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 PPP1R15BQ5SWA1 713 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 N4BP2L1Q5TBK1 243 aaPredicted RBP14.32□□□□□ -0.12
CLIP3-205ENST00000592017 CCDC185Q8N715 623 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 PRCCQ92733 491 aaPredicted RBP14.32□□□□□ -0.12
CLIP3-205ENST00000592017 MYO19Q96H55 970 aa14.32□□□□□ -0.12
CLIP3-205ENST00000592017 VCPIP1Q96JH7 1222 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms