RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RNF43Q68DV7 783 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 TMC6Q7Z403 805 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 TFAP2DQ7Z6R9 452 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 ZNF354CQ86Y25 554 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 CACUL1Q86Y37 369 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 VSTM4Q8IW00 320 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 KIAA2013Q8IYS2 634 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 OR2T3Q8NH03 318 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 OLIG1Q8TAK6 271 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 CENPIQ92674 756 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 RPL10LQ96L21 214 aaKnown RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 MRGPRX1Q96LB2 322 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 SYT11Q9BT88 431 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 OSBPL2Q9H1P3 480 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 SLC6A17Q9H1V8 727 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 ARRDC1-AS1Q9H2J1 176 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 FBRSQ9HAH7 460 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 ANLNQ9NQW6 1124 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 MPP6Q9NZW5 540 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 INTS6Q9UL03 887 aaKnown RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 RALGAPA1Q6GYQ0 2036 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 DNAH14Q0VDD8 3507 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 TPRP12270 2363 aaKnown RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 TTC34A8MYJ7 566 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 DAPK3O43293 454 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 AP5Z1O43299 807 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 ATMINO43313 823 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 CREB3O43889 395 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 BNIP3LO60238 219 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 DNTTP04053 509 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 SDHBP21912 280 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 BCKDHBP21953 392 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 EIF4A3P38919 411 aaKnown RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 CTSOP43234 321 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 PLK1P53350 603 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 HDAC4P56524 1084 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 ENPP2Q13822 863 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 PTPRNQ16849 979 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 MAP7D1Q3KQU3 841 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 RAB6CQ53S08 254 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 ALFQ53S48 1182 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 PLEKHA7Q6IQ23 1121 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 ALKBH5Q6P6C2 394 aaKnown RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 ARMCX6Q7L4S7 300 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 CYP2U1Q7Z449 544 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 SETD3Q86TU7 594 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 DRC7Q8IY82 874 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 TMEFF1Q8IYR6 380 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 DEFB119Q8N690 84 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 CCDC185Q8N715 623 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 C12orf50Q8NA57 414 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 KDM1BQ8NB78 822 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 TBC1D31Q96DN5 1066 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 ZC3H10Q96K80 434 aaKnown RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 LMLNQ96KR4 655 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 NCAPGQ9BPX3 1015 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 FEM1AQ9BSK4 669 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 ANP32EQ9BTT0 268 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 C2orf49Q9BVC5 232 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 RAB6CQ9H0N0 254 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 ISCUQ9H1K1 167 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 DUSP15Q9H1R2 295 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 TMEM245Q9H330 911 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 PRSS16Q9NQE7 514 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 PCSK1NQ9UHG2 260 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 SLCO3A1Q9UIG8 710 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 NCKAP1Q9Y2A7 1128 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 FARP1Q9Y4F1 1045 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-227ENST00000591849 NCOR2Q9Y618 2525 aa10.35□□□□□ -0.75
BRCA1-227ENST00000591849 SPTBN2O15020 2390 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 EDDM13A0A1B0GTR0 161 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 TCRBV5S1A1TA0A578 114 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 ILVBLA1L0T0 632 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 TARSL2A2RTX5 802 aaKnown RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 TMEM191CA6NGB0 347 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 AKR1B15C9JRZ8 316 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 AKR1B10O60218 316 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 PRPSAP2O60256 369 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 SIN3BO75182 1162 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 EPN2O95208 641 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 RHOQP17081 205 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 CD6P30203 668 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 OXTRP30559 389 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 ETFBP38117 255 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 SSR1P43307 286 aaKnown RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 STK19P49842 368 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 IRAK1P51617 712 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 AIF1P55008 147 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 ADKP55263 362 aaKnown RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 CAMK2GQ13555 558 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 HNRNPA1L2Q32P51 320 aaKnown RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 TTC31Q49AM3 519 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 C5orf22Q49AR2 442 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 PPP1R15BQ5SWA1 713 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 SYCP2LQ5T4T6 812 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 LYSMD4Q5XG99 296 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 HGSNATQ68CP4 663 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 ZNF776Q68DI1 518 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 IL31Q6EBC2 164 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms