RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 DFNA5O60443 496 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 LUC7L3O95232 432 aaKnown RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 FGFR1OPO95684 399 aaKnown RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 IGHV4-34P06331 123 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 CSKP41240 450 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 PLK1P53350 603 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 ST8SIA6P61647 398 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 GUCA2AQ02747 115 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 SLC12A1Q13621 1099 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 DCAF6Q58WW2 860 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 DENND1BQ6P3S1 775 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 TAC4Q86UU9 113 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 CACUL1Q86Y37 369 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 PNPLA1Q8N8W4 532 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 SETD7Q8WTS6 366 aaKnown RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 IGSF8Q969P0 613 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 BTN2A3PQ96KV6 586 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 FAM129BQ96TA1 746 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 USB1Q9BQ65 265 aaKnown RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 INTS2Q9H0H0 1204 aaKnown RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 NUCKS1Q9H1E3 243 aaKnown RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 PABPC3Q9H361 631 aaKnown RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 MTG2Q9H4K7 406 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 POPDC2Q9HBU9 364 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 UBE2TQ9NPD8 197 aaPredicted RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 ST7Q9NRC1 585 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 ADAMTS1Q9UHI8 967 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 CYTH4Q9UIA0 394 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 ERVW-1Q9UQF0 538 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 SNX11Q9Y5W9 270 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 ITIH6Q6UXX5 1313 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 DMXL2Q8TDJ6 3036 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 A0A1W2PPC4 97 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 KCNU1A8MYU2 1149 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 CAPN9O14815 690 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 VILLO15195 856 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 RNASEH1O60930 286 aaKnown RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 SIN3BO75182 1162 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 DXOO77932 396 aaKnown RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 TRUB2O95900 331 aaKnown RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 GLI1P08151 1106 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 CTSKP43235 329 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 GALCP54803 685 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 ECT2LQ008S8 904 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 TPD52L1Q16890 204 aaPredicted RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 DPCR1Q3MIW9 517 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 HSP90AA4PQ58FG1 418 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 ZC3H12AQ5D1E8 599 aaKnown RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 PITRM1Q5JRX3 1037 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 KIAA0895LQ68EN5 471 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 TMPRSS7Q7RTY8 843 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 PROSER1Q86XN7 944 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 CCDC117Q8IWD4 279 aaPredicted RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 CFAP52Q8N1V2 620 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 CARNMT1Q8N4J0 409 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 WDTC1Q8N5D0 677 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 ADAM32Q8TC27 787 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 RHBDD1Q8TEB9 315 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 FAM149B1Q96BN6 582 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 PRMT1Q99873 361 aaKnown RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 NEUROG2Q9H2A3 272 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 FBXL12Q9NXK8 326 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 XPO7Q9UIA9 1087 aaKnown RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 SLCO3A1Q9UIG8 710 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 FZD4Q9ULV1 537 aa10.75□□□□□ -0.69
VPS4B-207ENST00000591519 TPX2Q9ULW0 747 aaKnown RBP10.75□□□□□ -0.69
VPS4B-207ENST00000591519 WDFY3Q8IZQ1 3526 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 PTPRBP23467 1997 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 EDDM13A0A1B0GTR0 161 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 GTPBP10A4D1E9 387 aaKnown RBP10.74□□□□□ -0.69
VPS4B-207ENST00000591519 BECN2A8MW95 431 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 E5RJQ4 531 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 TNFSF14O43557 240 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 FSBPO95073 299 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 LETM1O95202 739 aaPredicted RBP10.74□□□□□ -0.69
VPS4B-207ENST00000591519 MOCS3O95396 460 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 MBD3O95983 291 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 APOEP02649 317 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 ATXN1LP0C7T5 689 aaKnown RBP10.74□□□□□ -0.69
VPS4B-207ENST00000591519 SLC2A3P11169 496 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 KRT5P13647 590 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 TACR2P21452 398 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 SLC8A1P32418 973 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 CCR5P51681 352 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 RACK1P63244 317 aaKnown RBP10.74□□□□□ -0.69
VPS4B-207ENST00000591519 SCAPQ12770 1279 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 MTA1Q13330 715 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 CDH18Q13634 790 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 CST6Q15828 149 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 KCNT1Q5JUK3 1230 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 TRIM65Q6PJ69 517 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 LRSAM1Q6UWE0 723 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 MMS22LQ6ZRQ5 1243 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 APCDD1Q8J025 514 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 LGI2Q8N0V4 545 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 ATP6V0D2Q8N8Y2 350 aa10.74□□□□□ -0.69
VPS4B-207ENST00000591519 MLKLQ8NB16 471 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms