RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	KDM1B	Q8NB78	822 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	OR52K2	Q8NGK3	314 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	ALG14	Q96F25	216 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	SIPA1	Q96FS4	1042 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	MYO19	Q96H55	970 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	RPL10L	Q96L21	214 aa	Known RBP	9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	MRGPRX3	Q96LB0	322 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	PPP1R9B	Q96SB3	815 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	FEM1A	Q9BSK4	669 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	CNPY3	Q9BT09	278 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	ISCU	Q9H1K1	167 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	ARRDC1-AS1	Q9H2J1	176 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	PARD6A	Q9NPB6	346 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	PARVA	Q9NVD7	372 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	MPP6	Q9NZW5	540 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	OR12D3	Q9UGF7	316 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	SUN2	Q9UH99	717 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	ADAMTS1	Q9UHI8	967 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	CYP8B1	Q9UNU6	501 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	ERVW-1	Q9UQF0	538 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	TBC1D30	Q9Y2I9	924 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	9.46	□□□□□ -0.9	1e-8	■■□□□ 14.5
DNMT1-223	ENST00000591239	OR51B4	Q9Y5P0	310 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	SPTBN4	Q9H254	2564 aa		9.46	□□□□□ -0.9
DNMT1-223	ENST00000591239	MUC22	E2RYF6	1773 aa	Predicted RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	CKAP5	Q14008	2032 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	IGHV1OR15-9	A0A0B4J2B8	117 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	CCP110	O43303	1012 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	ATMIN	O43313	823 aa	Predicted RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	EPN2	O95208	641 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	SRPRA	P08240	638 aa	Known RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	PLEK	P08567	350 aa	Predicted RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	ACADM	P11310	421 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	OR1E1	P30953	314 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	STK19	P49842	368 aa	Predicted RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	NRG1	Q02297	640 aa	Predicted RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	RPL6	Q02878	288 aa	Known RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	SULT2A1	Q06520	285 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	ARID5B	Q14865	1188 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	CCDC6	Q16204	474 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	HNRNPA1L2	Q32P51	320 aa	Known RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	SPDYC	Q5MJ68	293 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	RNF219	Q5W0B1	726 aa	Predicted RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	SPECC1L	Q69YQ0	1117 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	PLEKHA7	Q6IQ23	1121 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	SLC36A4	Q6YBV0	504 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	TFAP2D	Q7Z6R9	452 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	SETD3	Q86TU7	594 aa	Predicted RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	VPS36	Q86VN1	386 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	TMEFF1	Q8IYR6	380 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	CCDC185	Q8N715	623 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	OR2T3	Q8NH03	318 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	PRCC	Q92733	491 aa	Predicted RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	ZYG11B	Q9C0D3	744 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	MUC3B	Q9H195	1237 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	OSBPL2	Q9H1P3	480 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	MTG2	Q9H4K7	406 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	FBRS	Q9HAH7	460 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	CD93	Q9NPY3	652 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	PRSS16	Q9NQE7	514 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	ITM2C	Q9NQX7	267 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	SEMA4G	Q9NTN9	838 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	USP36	Q9P275	1121 aa	Known RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	PPARGC1A	Q9UBK2	798 aa	Known RBP	9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	SLCO3A1	Q9UIG8	710 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	VPS28	Q9UK41	221 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	USP18	Q9UMW8	372 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	PCDHGA5	Q9Y5G8	931 aa		9.45	□□□□□ -0.9
DNMT1-223	ENST00000591239	PLXND1	Q9Y4D7	1925 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	THADA	Q6YHU6	1953 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239		A0A087X0T9	212 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	BCLAF3	A2AJT9	711 aa	Known RBP	9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	TMEM191C	A6NGB0	347 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	TTC34	A8MYJ7	566 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	FAM72C	H0Y354	149 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	AP5Z1	O43299	807 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	SIN3B	O75182	1162 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	RHOC	P08134	193 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	FAM228B	P0C875	321 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	MYBL1	P10243	752 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	C7	P10643	843 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	DES	P17661	470 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	HNRNPH3	P31942	346 aa	Known RBP	9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	MPL	P40238	635 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	NNMT	P40261	264 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	PTGER3	P43115	390 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	DHPS	P49366	369 aa	Predicted RBP	9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	TPMT	P51580	245 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	OGDH	Q02218	1023 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	CREB5	Q02930	508 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	SCAP	Q12770	1279 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	TRIM14	Q14142	442 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	CSRP2	Q16527	193 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	PLA2G2C	Q5R387	149 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	C9orf64	Q5T6V5	341 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	FAM72A	Q5TYM5	149 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	MANEAL	Q5VSG8	457 aa		9.44	□□□□□ -0.9
DNMT1-223	ENST00000591239	FAM72D	Q6L9T8	149 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms