RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 PDIK1LQ8N165 341 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ARL14EPQ8N8R7 260 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 MAB21L3Q8N8X9 362 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 UBLCP1Q8WVY7 318 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 TIFAQ96CG3 184 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 CCDC77Q9BR77 488 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 RNF38Q9H0F5 515 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 MAGEH1Q9H213 219 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 RAB6BQ9NRW1 208 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 HPCAL4Q9UM19 191 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ARHGAP26Q9UNA1 814 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 SNX10Q9Y5X0 201 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 CPQQ9Y646 472 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 A0A1B0GVM2 712 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 E2F8A0AVK6 867 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 TCAF2A6NFQ2 919 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 MATN3O15232 486 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 CSPG5O95196 566 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 RHOP08100 348 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 ZSCAN5DPP0CG00 497 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 IRF1P10914 325 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 ETS1P14921 441 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 EPCAMP16422 314 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 TPSB2P20231 275 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 ECHS1P30084 290 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 GDF10P55107 478 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 TPSAB1Q15661 275 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 TEX44Q53QW1 395 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 DNAJC21Q5F1R6 531 aaKnown RBP13.31□□□□□ -0.28
PTBP1-216ENST00000590887 DENND2CQ68D51 928 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 FAM109BQ6ICB4 259 aaPredicted RBP13.31□□□□□ -0.28
PTBP1-216ENST00000590887 HTR3DQ70Z44 454 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 GAREM2Q75VX8 874 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 C14orf80Q86SX3 495 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 NLRP14Q86W24 1093 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 RELL1Q8IUW5 271 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 GSPT2Q8IYD1 628 aaKnown RBP13.31□□□□□ -0.28
PTBP1-216ENST00000590887 ZNF683Q8IZ20 524 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 CNPY4Q8N129 248 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 CPXM2Q8N436 756 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 HJURPQ8NCD3 748 aaPredicted RBP13.31□□□□□ -0.28
PTBP1-216ENST00000590887 MCUQ8NE86 351 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 MRPL38Q96DV4 380 aaKnown RBP13.31□□□□□ -0.28
PTBP1-216ENST00000590887 LGMNQ99538 433 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 KIF9Q9HAQ2 790 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 SP110Q9HB58 689 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 EIF2B3Q9NR50 452 aaKnown RBP13.31□□□□□ -0.28
PTBP1-216ENST00000590887 GKN1Q9NS71 199 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 LMCD1Q9NZU5 365 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 SEPT10Q9P0V9 454 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 IGSF9Q9P2J2 1179 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 TBC1D14Q9P2M4 693 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 AGO1Q9UL18 857 aaKnown RBP13.31□□□□□ -0.28
PTBP1-216ENST00000590887 ATP8A1Q9Y2Q0 1164 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 AAR2Q9Y312 384 aaKnown RBP13.31□□□□□ -0.28
PTBP1-216ENST00000590887 HCFC2Q9Y5Z7 792 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 DOCK4Q8N1I0 1966 aa13.31□□□□□ -0.28
PTBP1-216ENST00000590887 OBSL1O75147 1896 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 ILVBLA1L0T0 632 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 RNF103O00237 685 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 SLC9A3R1O14745 358 aaPredicted RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 MAP3K6O95382 1288 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 TSHRP16473 764 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 PHBP35232 272 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 GGCXP38435 758 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 PBX2P40425 430 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 IFI35P80217 286 aaPredicted RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 CYP4F8P98187 520 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 HNRNPDQ14103 355 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 TRADDQ15628 312 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 HIF1AQ16665 826 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 MPPE1Q53F39 396 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 AFMIDQ63HM1 303 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 RHBDF2Q6PJF5 856 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 LRIG3Q6UXM1 1119 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 TMC3Q7Z5M5 1100 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 RBM23Q86U06 439 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 CCDC25Q86WR0 208 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 SMG7Q92540 1137 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 OTUB2Q96DC9 234 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 TMA16Q96EY4 203 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 CELF6Q96J87 481 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 ZNF599Q96NL3 588 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 RBM15Q96T37 977 aaKnown RBP eCLIP13.3□□□□□ -0.281e-11■■■□□ 18.2
PTBP1-216ENST00000590887 SLC39A8Q9C0K1 460 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 XAB2Q9HCS7 855 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 MED4Q9NPJ6 270 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 MPP6Q9NZW5 540 aa13.3□□□□□ -0.28
PTBP1-216ENST00000590887 DNMT3BQ9UBC3 853 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 IPO11Q9UI26 975 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 XPO7Q9UIA9 1087 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 MRPS23Q9Y3D9 190 aaKnown RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
PTBP1-216ENST00000590887 RASA4BC9J798 803 aa13.29□□□□□ -0.28
PTBP1-216ENST00000590887 PER2O15055 1255 aa13.29□□□□□ -0.28
PTBP1-216ENST00000590887 RASA4O43374 803 aa13.29□□□□□ -0.28
PTBP1-216ENST00000590887 ANXA9O76027 345 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms