RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 MYLK2Q9H1R3 596 aa5.04□□□□□ -1.6
SAFB-208ENST00000590485 USP29Q9HBJ7 922 aa5.04□□□□□ -1.6
SAFB-208ENST00000590485 FBXO28Q9NVF7 368 aa5.04□□□□□ -1.6
SAFB-208ENST00000590485 GRHPRQ9UBQ7 328 aa5.04□□□□□ -1.6
SAFB-208ENST00000590485 SCN7AQ01118 1682 aa5.04□□□□□ -1.6
SAFB-208ENST00000590485 THSD7BQ9C0I4 1608 aa5.04□□□□□ -1.6
SAFB-208ENST00000590485 UBR2Q8IWV8 1755 aa5.04□□□□□ -1.6
SAFB-208ENST00000590485 DHHO43323 396 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 TAF5LO75529 589 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 ACTL6BO94805 426 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 TMIGD3P0DMS9 266 aaPredicted RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 KLRK1P26718 216 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 HALP42357 657 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 EPS15P42566 896 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 COPB1P53618 953 aaKnown RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 HOXA4Q00056 320 aaPredicted RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 DEUP1Q05D60 604 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 CCDC15Q0P6D6 951 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 CBFBQ13951 182 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 PRKG1Q13976 671 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 KCNJ12Q14500 433 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 GRM4Q14833 912 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 RNASE12Q5GAN4 147 aaKnown RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 FAM90A2PQ658T7 463 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 SUMO4Q6EEV6 95 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 OLFM4Q6UX06 510 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 SERPINA13PQ6UXR4 307 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 CCDC117Q8IWD4 279 aaPredicted RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 NKAPQ8N5F7 415 aaKnown RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 FAM71DQ8N9W8 422 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 RSC1A1Q92681 617 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 HS6ST2Q96MM7 605 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 SNX18Q96RF0 628 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 MACROD1Q9BQ69 325 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 SYNPO2LQ9H987 977 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 ALG13Q9NP73 1137 aaKnown RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 FSCN3Q9NQT6 498 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 SCAF8Q9UPN6 1271 aaKnown RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 UBE2J1Q9Y385 318 aaPredicted RBP5.03□□□□□ -1.6
SAFB-208ENST00000590485 PCDHB2Q9Y5E7 798 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 TRPM7Q96QT4 1865 aa5.03□□□□□ -1.6
SAFB-208ENST00000590485 TARM1B6A8C7 271 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 H7C1Q1 480 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 ZNF213O14771 459 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 CTIFO43310 598 aaKnown RBP5.02□□□□□ -1.61
SAFB-208ENST00000590485 GCATO75600 419 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 CELF2O95319 508 aaKnown RBP5.02□□□□□ -1.61
SAFB-208ENST00000590485 NUDT3O95989 172 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 RENBPP51606 427 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 HMGA2P52926 109 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 COL10A1Q03692 680 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 DNASE1L3Q13609 305 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 LIN54Q6MZP7 749 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 PIK3AP1Q6ZUJ8 805 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 RFX8Q6ZV50 586 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 RAB11FIP2Q7L804 512 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 C12orf76Q8N812 135 aaPredicted RBP5.02□□□□□ -1.61
SAFB-208ENST00000590485 BOLLQ8N9W6 283 aaKnown RBP5.02□□□□□ -1.61
SAFB-208ENST00000590485 IL17REQ8NFR9 667 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 RUBCNQ92622 972 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 FAR2Q96K12 515 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 FYTTD1Q96QD9 318 aaKnown RBP5.02□□□□□ -1.61
SAFB-208ENST00000590485 TMEM120AQ9BXJ8 343 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 RIOX1Q9H6W3 641 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 ADARB2Q9NS39 739 aaKnown RBP5.02□□□□□ -1.61
SAFB-208ENST00000590485 RXFP3Q9NSD7 469 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 NIP7Q9Y221 180 aaKnown RBP eCLIP5.02□□□□□ -1.61
SAFB-208ENST00000590485 KNSTRNQ9Y448 316 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 USP16Q9Y5T5 823 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 CASP8AP2Q9UKL3 1982 aa5.02□□□□□ -1.61
SAFB-208ENST00000590485 LTBP1Q14766 1721 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 GXYLT2A0PJZ3 443 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 UBE2Q2LH0YL09 131 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 RPP40O75818 363 aaKnown RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 SLC3A2P08195 630 aaKnown RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 APEHP13798 732 aaKnown RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 MATN1P21941 496 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 BMP5P22003 454 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 IGHMBP2P38935 993 aaKnown RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 JAK3P52333 1124 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 ELLP55199 621 aaPredicted RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 AP2B1P63010 937 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 GPC5P78333 572 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 CFHR3Q02985 330 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 KCNB1Q14721 858 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 TIGD6Q17RP2 521 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 BTBD16Q32M84 506 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 C4orf46Q504U0 113 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 INO80DQ53TQ3 878 aaPredicted RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 ZNF362Q5T0B9 420 aaPredicted RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 MSANTD2Q6P1R3 559 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 TMEM65Q6PI78 240 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 RINLQ6ZS11 566 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 BCDIN3DQ7Z5W3 292 aaKnown RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 TRABD2AQ86V40 505 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 SLC44A2Q8IWA5 706 aaPredicted RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 MAFAQ8NHW3 353 aaPredicted RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 STT3BQ8TCJ2 826 aa5.01□□□□□ -1.61
SAFB-208ENST00000590485 EDC3Q96F86 508 aaKnown RBP5.01□□□□□ -1.61
SAFB-208ENST00000590485 SCLT1Q96NL6 688 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms