RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ENC1O14682 589 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 TJP3O95049 919 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 RHOCP08134 193 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 DRD1P21728 446 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 HLA-FP30511 346 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 SERPINB6P35237 376 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 TNFRSF4P43489 277 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 SOX9P48436 509 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 STARD6P59095 220 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 GNA12Q03113 381 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 POLD3Q15054 466 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-218ENST00000589294 PAFAH1B3Q15102 231 aaKnown RBP12.49□□□□□ -0.41
DNMT1-218ENST00000589294 E2F5Q15329 346 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 PARP15Q460N3 678 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 AFMIDQ63HM1 303 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 SLC9A4Q6AI14 798 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 ASTLQ6HA08 431 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-218ENST00000589294 BZW1Q7L1Q6 419 aaKnown RBP12.49□□□□□ -0.41
DNMT1-218ENST00000589294 LRRC49Q8IUZ0 686 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 PHTF2Q8N3S3 785 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 PQLC3Q8N755 202 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-218ENST00000589294 WFIKKN2Q8TEU8 576 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 EDAQ92838 391 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 CHFRQ96EP1 664 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 WDR24Q96S15 920 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 OSBPL8Q9BZF1 889 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 KLC2Q9H0B6 622 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 LRRC19Q9H756 370 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 ARHGEF3Q9NR81 526 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 DNAI1Q9UI46 699 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 MRPS17Q9Y2R5 130 aaKnown RBP12.49□□□□□ -0.41
DNMT1-218ENST00000589294 OR51B4Q9Y5P0 310 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 RAD54BQ9Y620 910 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 TTC28Q96AY4 2481 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 F5P12259 2224 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 MYOFQ9NZM1 2061 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 TRIOO75962 3097 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 CXorf51AA0A1B0GTR3 108 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 TBC1D3BA6NDS4 549 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-218ENST00000589294 CES2O00748 559 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 APOL1O14791 398 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 NCAM2O15394 837 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 DCXO43602 365 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 RAMP2O60895 175 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 KAT7O95251 611 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 APODP05090 189 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 PABPC1P11940 636 aaKnown RBP12.48□□□□□ -0.41
DNMT1-218ENST00000589294 ALADP13716 330 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 CD70P32970 193 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 NR2C2P49116 596 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 GRSF1Q12849 480 aaKnown RBP eCLIP12.48□□□□□ -0.41
DNMT1-218ENST00000589294 LMAN2Q12907 356 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 TMEM196Q5HYL7 178 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 IER5LQ5T953 404 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 DCAF12L1Q5VU92 463 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 RNF219Q5W0B1 726 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-218ENST00000589294 PAPD7Q5XG87 772 aaKnown RBP12.48□□□□□ -0.41
DNMT1-218ENST00000589294 TXNDC11Q6PKC3 985 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 TPRG1Q6ZUI0 275 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 BBS12Q6ZW61 710 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 ANKS1BQ7Z6G8 1248 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 C12orf40Q86WS4 652 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 RFX6Q8HWS3 928 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 AHI1Q8N157 1196 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 PLD5Q8N7P1 536 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 CCDC26Q8TAB7 109 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 WFDC5Q8TCV5 224 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 FAM3CQ92520 227 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 TTC17Q96AE7 1141 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 ALG14Q96F25 216 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 NAPGQ99747 312 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-218ENST00000589294 NOL6Q9H6R4 1146 aaKnown RBP12.48□□□□□ -0.41
DNMT1-218ENST00000589294 FBRSL1Q9HCM7 1045 aaKnown RBP12.48□□□□□ -0.41
DNMT1-218ENST00000589294 ABCB8Q9NUT2 735 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 NDFIP2Q9NV92 336 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 ETNK2Q9NVF9 386 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 GGA2Q9UJY4 613 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
DNMT1-218ENST00000589294 DOCK4Q8N1I0 1966 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 VCANP13611 3396 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 KRBA1A5PL33 1030 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 ARHGAP42A6NI28 874 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 SHISA7A6NL88 538 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 CST8O60676 142 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 ATP1A1P05023 1023 aaKnown RBP12.47□□□□□ -0.41
DNMT1-218ENST00000589294 ATP5BP06576 529 aaKnown RBP12.47□□□□□ -0.41
DNMT1-218ENST00000589294 KRT10P13645 584 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 TCP1P17987 556 aaKnown RBP12.47□□□□□ -0.41
DNMT1-218ENST00000589294 MX2P20592 715 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 TGM2P21980 687 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 CASQ1P31415 396 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 DNA2P51530 1060 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 SULT2A1Q06520 285 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 SLC20A2Q08357 652 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 SIGLEC14Q08ET2 396 aa12.47□□□□□ -0.41
DNMT1-218ENST00000589294 ZNF211Q13398 564 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms