RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 BBOF1Q8ND07 529 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 HTR3CQ8WXA8 447 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 ING5Q8WYH8 240 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.85■■□□□ 1.25
ATG4D-209ENST00000588857 LRRC45Q96CN5 670 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 TDP1Q9NUW8 608 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 WHRNQ9P202 907 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 GREM1O60565 184 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 GLP2RO95838 553 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 CEBPBP17676 345 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 ITIH2P19823 946 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 GARSP41250 739 aaKnown RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 NDST2P52849 883 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 UMODL1-AS1Q8N2C9 162 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 SH3RF2Q8TEC5 729 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 HDAC11Q96DB2 347 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 RTP4Q96DX8 246 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 MYEOVQ96EZ4 313 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 ASB2Q96Q27 587 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 NDFIP2Q9NV92 336 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 ZFP37Q9Y6Q3 630 aaPredicted RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 XIRP2A4UGR9 3374 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 NUP210Q8TEM1 1887 aaPredicted RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 TRDMT1O14717 391 aaKnown RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 SCAMP3O14828 347 aaKnown RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 LINC01565O15544 149 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 MYBL2P10244 700 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 OR1E1P30953 314 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 MAPKAPK2P49137 400 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 TFF2Q03403 129 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 PPIDQ08752 370 aaKnown RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 P3H1Q32P28 736 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 TTC39BQ5VTQ0 682 aaPredicted RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 CIR1Q86X95 450 aaPredicted RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 GSPT2Q8IYD1 628 aaKnown RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 ITFG1Q8TB96 612 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 HNRNPLLQ8WVV9 542 aaKnown RBP22.84■■□□□ 1.25
ATG4D-209ENST00000588857 APOL5Q9BWW9 433 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 SLC39A8Q9C0K1 460 aa22.84■■□□□ 1.25
ATG4D-209ENST00000588857 NYNRINQ9P2P1 1898 aaKnown RBP22.83■■□□□ 1.25
ATG4D-209ENST00000588857 REV3LO60673 3130 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 VCANP13611 3396 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.83■■□□□ 1.25
ATG4D-209ENST00000588857 E2F8A0AVK6 867 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 TYW5A2RUC4 315 aaKnown RBP22.83■■□□□ 1.25
ATG4D-209ENST00000588857 MTSS1O43312 755 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 TSPAN3O60637 253 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 IVDP26440 423 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 RPL22P35268 128 aaKnown RBP22.83■■□□□ 1.25
ATG4D-209ENST00000588857 CLCN6P51797 869 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 PLTPP55058 493 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 CDH4P55283 916 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 RPS24P62847 133 aaKnown RBP22.83■■□□□ 1.25
ATG4D-209ENST00000588857 TJAP1Q5JTD0 557 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 AFMIDQ63HM1 303 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 ANKRD54Q6NXT1 300 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 C4orf22Q6V702 233 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 GPR149Q86SP6 731 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 LRRC49Q8IUZ0 686 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 ARHGAP12Q8IWW6 846 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 ATPAF2Q8N5M1 289 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 USP13Q92995 863 aaPredicted RBP22.83■■□□□ 1.25
ATG4D-209ENST00000588857 P2RY11Q96G91 374 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 PRICKLE1Q96MT3 831 aaPredicted RBP22.83■■□□□ 1.25
ATG4D-209ENST00000588857 FAM129AQ9BZQ8 928 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 ARFGAP3Q9NP61 516 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 GRHL1Q9NZI5 618 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 CCL26Q9Y258 94 aa22.83■■□□□ 1.25
ATG4D-209ENST00000588857 MYO18AQ92614 2054 aaKnown RBP22.82■■□□□ 1.24
ATG4D-209ENST00000588857 NDC80O14777 642 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 CLDN11O75508 207 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 SEC31AO94979 1220 aaKnown RBP22.82■■□□□ 1.24
ATG4D-209ENST00000588857 VAV1P15498 845 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 FSHRP23945 695 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 CHKAP35790 457 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 ZNF33AQ06730 810 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 CBX2Q14781 532 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-209ENST00000588857 AAK1Q2M2I8 961 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 IZUMO3Q5VZ72 239 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 ZSWIM3Q96MP5 696 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 SEPT10Q9P0V9 454 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 PAK5Q9P286 719 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 ANAPC5Q9UJX4 755 aa22.82■■□□□ 1.24
ATG4D-209ENST00000588857 C5orf60A6NFR6 353 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 ARHGAP42A6NI28 874 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 GCATO75600 419 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 HOXB8P17481 243 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-209ENST00000588857 NRLP54845 237 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 CAV1Q03135 178 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 CHST9Q7L1S5 443 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 BBS7Q8IWZ6 715 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 FAM217AQ8IXS0 508 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 CCDC13Q8IYE1 715 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 HJURPQ8NCD3 748 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-209ENST00000588857 ART4Q93070 314 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 TSGA13Q96PP4 275 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 UBE2ZQ9H832 354 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-209ENST00000588857 ZNF212Q9UDV6 495 aa22.81■■□□□ 1.24
ATG4D-209ENST00000588857 TPX2Q9ULW0 747 aaKnown RBP22.81■■□□□ 1.24
ATG4D-209ENST00000588857 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms