RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 UQCRHLA0A096LP55 91 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 E9PAM4 449 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 ZNF185O15231 689 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 LRCH4O75427 683 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 PROSCO94903 275 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 UQCRHP07919 91 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 PABPC1P11940 636 aaKnown RBP20.73■□□□□ 0.91
ATG4D-208ENST00000588667 PAFAH1B1P43034 410 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 CCR3P51677 355 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 HSF5Q4G112 596 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-208ENST00000588667 EFHC2Q5JST6 749 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 PKN3Q6P5Z2 889 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 CHST9Q7L1S5 443 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 KIAA0907Q7Z7F0 614 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-208ENST00000588667 CREG2Q8IUH2 290 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 ARFGAP1Q8N6T3 406 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 ACDQ96AP0 544 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 OR12D3Q9UGF7 316 aa20.73■□□□□ 0.91
ATG4D-208ENST00000588667 CCDC66A2RUB6 948 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 CTAGE15A4D2H0 777 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 DRGXA6NNA5 263 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 H0Y626 953 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 CLDN11O75508 207 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 CTAGE8P0CG41 777 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 MAN1A1P33908 653 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 PCK1P35558 622 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 IRAK1P51617 712 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 C2orf27AQ580R0 203 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 MANEALQ5VSG8 457 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 CTAGE6Q86UF2 777 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 CTAGE4Q8IX94 777 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 AHI1Q8N157 1196 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 KCNH6Q9H252 994 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 FZD10Q9ULW2 581 aa20.72■□□□□ 0.91
ATG4D-208ENST00000588667 EFCAB8A8MWE9 144 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 CTIFO43310 598 aaKnown RBP20.71■□□□□ 0.91
ATG4D-208ENST00000588667 LAMTOR5O43504 91 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 MIPP30301 263 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 TIE1P35590 1138 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 CDH4P55283 916 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 TUBB4BP68371 445 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 LMAN2Q12907 356 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 ARTNQ5T4W7 220 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 TRMT11Q7Z4G4 463 aaKnown RBP20.71■□□□□ 0.91
ATG4D-208ENST00000588667 ZNF513Q8N8E2 541 aaPredicted RBP20.71■□□□□ 0.91
ATG4D-208ENST00000588667 LMLNQ96KR4 655 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 PRMT8Q9NR22 394 aaPredicted RBP20.71■□□□□ 0.91
ATG4D-208ENST00000588667 PPARGC1AQ9UBK2 798 aaKnown RBP20.71■□□□□ 0.91
ATG4D-208ENST00000588667 HCN4Q9Y3Q4 1203 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 ANTXRLA6NF34 631 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 DDX3YO15523 660 aaKnown RBP20.71■□□□□ 0.91
ATG4D-208ENST00000588667 TIMM44O43615 452 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 PRPSAP2O60256 369 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 PAPSS2O95340 614 aaPredicted RBP20.71■□□□□ 0.91
ATG4D-208ENST00000588667 CTNNA2P26232 953 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 CD70P32970 193 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 CXCL12P48061 93 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 OXCT1P55809 520 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 FSCBQ5H9T9 825 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 EMC10Q5UCC4 262 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 TMEM215Q68D42 235 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 SYT13Q7L8C5 426 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 IL17RCQ8NAC3 791 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 UCMAQ8WVF2 138 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 PEBP4Q96S96 227 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 ZYG11BQ9C0D3 744 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 CARD9Q9H257 536 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 ELOVL2Q9NXB9 296 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 KIAA1522Q9P206 1035 aaPredicted RBP20.71■□□□□ 0.91
ATG4D-208ENST00000588667 USP18Q9UMW8 372 aa20.71■□□□□ 0.91
ATG4D-208ENST00000588667 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-208ENST00000588667 CNTN5O94779 1100 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 LRIG2O94898 1065 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 L1CAMP32004 1257 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 CTNNA1P35221 906 aaKnown RBP20.7■□□□□ 0.9
ATG4D-208ENST00000588667 ZNF177Q13360 481 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-208ENST00000588667 SLC12A1Q13621 1099 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 E2F5Q15329 346 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 ANGPT1Q15389 498 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 ALFQ53S48 1182 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 EGFLAMQ63HQ2 1017 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 CXorf57Q6NSI4 855 aaKnown RBP20.7■□□□□ 0.9
ATG4D-208ENST00000588667 ADIPOR2Q86V24 386 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 ALLCQ8N6M5 410 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 CIPCQ9C0C6 399 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 PCSK1NQ9UHG2 260 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 HCN2Q9UL51 889 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 MMP17Q9ULZ9 603 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 AP4E1Q9UPM8 1137 aa20.7■□□□□ 0.9
ATG4D-208ENST00000588667 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.7■□□□□ 0.9
ATG4D-208ENST00000588667 CHD5Q8TDI0 1954 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 FAM72CH0Y354 149 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 NPC1O15118 1278 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 KLF8O95600 359 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-208ENST00000588667 HNRNPLP14866 589 aaKnown RBP eCLIP20.69■□□□□ 0.9
ATG4D-208ENST00000588667 SATB1Q01826 763 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 DMC1Q14565 340 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 FUT11Q495W5 492 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 ERMARDQ5T6L9 678 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 FAM72AQ5TYM5 149 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms