RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 NLRC5Q86WI3 1866 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 NCAM2O15394 837 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 ELNP15502 786 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 MGAT1P26572 445 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 ABL2P42684 1182 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 TRIM71Q2Q1W2 868 aaKnown RBP17.98■□□□□ 0.47
ERCC2-211ENST00000588652 OVOS1Q6IE37 1185 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 ARID3BQ8IVW6 561 aaPredicted RBP17.98■□□□□ 0.47
ERCC2-211ENST00000588652 UNC5BQ8IZJ1 945 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 RAB3IL1Q8TBN0 382 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 OR12D3Q9UGF7 316 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 NOD1Q9Y239 953 aa17.98■□□□□ 0.47
ERCC2-211ENST00000588652 SHROOM3Q8TF72 1996 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 TMEM88BA6NKF7 163 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 CAPN14A8MX76 684 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 SNNO75324 88 aaPredicted RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 LUC7L3O95232 432 aaKnown RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 BPGMP07738 259 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 YY1P25490 414 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 PTPN3P26045 913 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 PPIDQ08752 370 aaKnown RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 IFRD2Q12894 506 aaPredicted RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 ITGA7Q13683 1181 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 KPNB1Q14974 876 aaKnown RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 TIFABQ6ZNK6 161 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 ZNF598Q86UK7 904 aaKnown RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 TAC4Q86UU9 113 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 SCML4Q8N228 414 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 PCSK9Q8NBP7 692 aaKnown RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 STKLD1Q8NE28 680 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 MCUR1Q96AQ8 359 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 SNX10Q9Y5X0 201 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 F8W810 466 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 TOP3BO95985 862 aaKnown RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 CMPK2Q5EBM0 449 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 ACSBG2Q5FVE4 666 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 FAM26DQ5JW98 314 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 CCNJLQ8IV13 435 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 SMC1BQ8NDV3 1235 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 UROC1Q96N76 676 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 EPAS1Q99814 870 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 C20orf27Q9GZN8 174 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 MMADHCQ9H3L0 296 aaPredicted RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 DONSONQ9NYP3 566 aa17.97■□□□□ 0.47
ERCC2-211ENST00000588652 KLHL8Q9P2G9 620 aaPredicted RBP17.97■□□□□ 0.47
ERCC2-211ENST00000588652 PATJQ8NI35 1801 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 BIRC5O15392 142 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 ZNF189O75820 626 aaPredicted RBP17.96■□□□□ 0.47
ERCC2-211ENST00000588652 LRIG2O94898 1065 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 SKIP12755 728 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 PAX3P23760 479 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 CNTFP26441 200 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 CDK18Q07002 472 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 BLMHQ13867 455 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 TREML1Q86YW5 311 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 TEX9Q8N6V9 391 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 CFAP61Q8NHU2 1237 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 SCAMP5Q8TAC9 235 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 HDAC11Q96DB2 347 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 SUSD3Q96L08 255 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 GORASP1Q9BQQ3 440 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 WWP1Q9H0M0 922 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 SUFUQ9UMX1 484 aa17.96■□□□□ 0.47
ERCC2-211ENST00000588652 HBS1LQ9Y450 684 aaKnown RBP17.96■□□□□ 0.47
ERCC2-211ENST00000588652 LIN7AO14910 233 aaPredicted RBP17.96■□□□□ 0.46
ERCC2-211ENST00000588652 PGAM1P18669 254 aa17.96■□□□□ 0.46
ERCC2-211ENST00000588652 ZNF135P52742 658 aaPredicted RBP17.96■□□□□ 0.46
ERCC2-211ENST00000588652 NIPAL4Q0D2K0 466 aa17.96■□□□□ 0.46
ERCC2-211ENST00000588652 DCLRE1AQ6PJP8 1040 aa17.96■□□□□ 0.46
ERCC2-211ENST00000588652 MARK2Q7KZI7 788 aaKnown RBP17.96■□□□□ 0.46
ERCC2-211ENST00000588652 CRLF3Q8IUI8 442 aa17.96■□□□□ 0.46
ERCC2-211ENST00000588652 DQX1Q8TE96 717 aaKnown RBP17.96■□□□□ 0.46
ERCC2-211ENST00000588652 NAT9Q9BTE0 207 aa17.96■□□□□ 0.46
ERCC2-211ENST00000588652 SYBUQ9NX95 663 aa17.96■□□□□ 0.46
ERCC2-211ENST00000588652 MARCOQ9UEW3 520 aaPredicted RBP17.96■□□□□ 0.46
ERCC2-211ENST00000588652 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.95■□□□□ 0.46
ERCC2-211ENST00000588652 KITP10721 976 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 ATP6V1C1P21283 382 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 CPA2P48052 419 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 RCN1Q15293 331 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 MAPRE1Q15691 268 aaKnown RBP17.95■□□□□ 0.46
ERCC2-211ENST00000588652 THEM5Q8N1Q8 247 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 WDR60Q8WVS4 1066 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 CDKL2Q92772 493 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 FAM167BQ9BTA0 163 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 BRD8Q9H0E9 1235 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 RNF186Q9NXI6 227 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 SLC17A6Q9P2U8 582 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 PPARGC1AQ9UBK2 798 aaKnown RBP17.95■□□□□ 0.46
ERCC2-211ENST00000588652 THSD7BQ9C0I4 1608 aa17.95■□□□□ 0.46
ERCC2-211ENST00000588652 KIF1CO43896 1103 aaKnown RBP17.94■□□□□ 0.46
ERCC2-211ENST00000588652 SMNDC1O75940 238 aaKnown RBP eCLIP17.94■□□□□ 0.46
ERCC2-211ENST00000588652 KRT36O76013 467 aa17.94■□□□□ 0.46
ERCC2-211ENST00000588652 MX2P20592 715 aa17.94■□□□□ 0.46
ERCC2-211ENST00000588652 GARSP41250 739 aaKnown RBP17.94■□□□□ 0.46
ERCC2-211ENST00000588652 AQP5P55064 265 aa17.94■□□□□ 0.46
ERCC2-211ENST00000588652 TSPY1Q01534 308 aa17.94■□□□□ 0.46
ERCC2-211ENST00000588652 GALNT2Q10471 571 aa17.94■□□□□ 0.46
ERCC2-211ENST00000588652 OLIG2Q13516 323 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms