RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MED15Q96RN5 788 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 EBF2Q9HAK2 575 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 DDIT4Q9NX09 232 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 SLC12A6Q9UHW9 1150 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 GPSM3Q9Y4H4 160 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 ZZEF1O43149 2961 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 ITIH6Q6UXX5 1313 aa14.15□□□□□ -0.15
HDAC5-208ENST00000588419 ACACAQ13085 2346 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3DA0A087WVF3 549 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3IA0A087WXS9 549 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3EA0A087X179 549 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3KA0A087X1G2 549 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 A0A1B0GTQ1 180 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TARSL2A2RTX5 802 aaKnown RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3FA6NER0 549 aaPredicted RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3LB9A6J9 549 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 VILLO15195 856 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3HP0C7X1 549 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 CD38P28907 300 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 MAT2AP31153 395 aaKnown RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 METAP1P53582 386 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 PPP2CBP62714 309 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 YWHAZP63104 245 aaKnown RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 PPP2CAP67775 309 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 APBA1Q02410 837 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 CYP4F3Q08477 520 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 NME3Q13232 169 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 RABGAP1LQ5R372 815 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3GQ6DHY5 549 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3CQ6IPX1 549 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 DBX2Q6ZNG2 339 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 TBC1D3Q8IZP1 549 aaPredicted RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 DEFB106AQ8N104 65 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 CCAR2Q8N163 923 aaKnown RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 ZNF606Q8WXB4 792 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 PTPRN2Q92932 1015 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 CNDP2Q96KP4 475 aaKnown RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 RPRD1AQ96P16 312 aaPredicted RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 ELF4Q99607 663 aaPredicted RBP14.14□□□□□ -0.15
HDAC5-208ENST00000588419 SLC4A5Q9BY07 1137 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 GDF3Q9NR23 364 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 SLC25A13Q9UJS0 675 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 FZD4Q9ULV1 537 aa14.14□□□□□ -0.15
HDAC5-208ENST00000588419 DOCK4Q8N1I0 1966 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 SHROOM3Q8TF72 1996 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 KCNU1A8MYU2 1149 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 ENC1O14682 589 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 WNT9AO14904 365 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 PCDHGA12O60330 932 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 GADD45BO75293 160 aaPredicted RBP14.13□□□□□ -0.15
HDAC5-208ENST00000588419 FGFR1OPO95684 399 aaKnown RBP14.13□□□□□ -0.15
HDAC5-208ENST00000588419 LDOC1O95751 146 aaPredicted RBP14.13□□□□□ -0.15
HDAC5-208ENST00000588419 CAPNS1P04632 268 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 ZNF18P17022 549 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 GOT1P17174 413 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 C5AR1P21730 350 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 CDK17Q00537 523 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 DNAJC3Q13217 504 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 KCNJ12Q14500 433 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 ELAVL3Q14576 367 aaKnown RBP14.13□□□□□ -0.15
HDAC5-208ENST00000588419 SLC45A4Q5BKX6 768 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 OR6B2Q6IFH4 312 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 FAM183BPQ6ZVS7 135 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 PDZD3Q86UT5 571 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 EID2Q8N6I1 236 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 KDM1BQ8NB78 822 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 C1orf131Q8NDD1 294 aaKnown RBP14.13□□□□□ -0.15
HDAC5-208ENST00000588419 OR8D1Q8WZ84 308 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 DCBLD2Q96PD2 775 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 FAM129BQ96TA1 746 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 THAP9Q9H5L6 903 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 SYNCQ9H7C4 482 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.13□□□□□ -0.15
HDAC5-208ENST00000588419 VANGL2Q9ULK5 521 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 GTF3C3Q9Y5Q9 886 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 DMXL2Q8TDJ6 3036 aa14.13□□□□□ -0.15
HDAC5-208ENST00000588419 A0A1B0GVM2 712 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 TRABD2BA6NFA1 517 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 TCAF2A6NFQ2 919 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 DFNA5O60443 496 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 RTN2O75298 545 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 IGLV3-25P01717 112 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 SLC9A1P19634 815 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 CCR1P32246 355 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 RPL34P49207 117 aaKnown RBP14.12□□□□□ -0.15
HDAC5-208ENST00000588419 IRAK1P51617 712 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 TTC39BQ5VTQ0 682 aaPredicted RBP14.12□□□□□ -0.15
HDAC5-208ENST00000588419 TRIM65Q6PJ69 517 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 ENOSF1Q7L5Y1 443 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 STK32AQ8WU08 396 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 LRIG1Q96JA1 1093 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 PPP1R13BQ96KQ4 1090 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 CPXM1Q96SM3 734 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 MYOCQ99972 504 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 ADAMTS1Q9UHI8 967 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 CNTN6Q9UQ52 1028 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 ZFYVE26Q68DK2 2539 aa14.12□□□□□ -0.15
HDAC5-208ENST00000588419 BECN2A8MW95 431 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 HSF2BPO75031 334 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms