RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ARID5BQ14865 1188 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 DCAF12L1Q5VU92 463 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 CXorf57Q6NSI4 855 aaKnown RBP20.13■□□□□ 0.81
TPM4-208ENST00000588410 EMC1Q8N766 993 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 PCDHB18PQ96TA0 734 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 MUC3BQ9H195 1237 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 PCED1AQ9H1Q7 454 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 ADAM22Q9P0K1 906 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 SLC25A13Q9UJS0 675 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 VPS28Q9UK41 221 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 SCML1Q9UN30 329 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 METTL12A8MUP2 240 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 CALB1P05937 261 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 UNGP13051 313 aaPredicted RBP20.12■□□□□ 0.81
TPM4-208ENST00000588410 FERP16591 822 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 SDC4P31431 198 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 STK19P49842 368 aaPredicted RBP20.12■□□□□ 0.81
TPM4-208ENST00000588410 IRAK1P51617 712 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 ATP11AP98196 1134 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 CLEC16AQ2KHT3 1053 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 C5orf22Q49AR2 442 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 C9orf64Q5T6V5 341 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 FAM131BQ86XD5 332 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 SNX19Q92543 992 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 C1orf74Q96LT6 269 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 AGPAT1Q99943 283 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 FEM1AQ9BSK4 669 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 PABPC3Q9H361 631 aaKnown RBP20.12■□□□□ 0.81
TPM4-208ENST00000588410 CAPN10Q9HC96 672 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 RTN4Q9NQC3 1192 aaKnown RBP20.12■□□□□ 0.81
TPM4-208ENST00000588410 FSCN3Q9NQT6 498 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 ANLNQ9NQW6 1124 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 SNX10Q9Y5X0 201 aa20.12■□□□□ 0.81
TPM4-208ENST00000588410 ITIH6Q6UXX5 1313 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 TEX33O43247 280 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 CNTN5O94779 1100 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 SEMA4FO95754 770 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 RHOCP08134 193 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 C7P10643 843 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 ACSL1P33121 698 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 ARL13BQ3SXY8 428 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 ACCSLQ4AC99 568 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 TRNP1Q6NT89 227 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 MMAAQ8IVH4 418 aaKnown RBP20.11■□□□□ 0.81
TPM4-208ENST00000588410 HDDC3Q8N4P3 179 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 RXFP2Q8WXD0 754 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 DNASE2BQ8WZ79 361 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 HAPLN3Q96S86 360 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 SELENOOQ9BVL4 669 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 SGK2Q9HBY8 427 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 TBC1D30Q9Y2I9 924 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 ABCA7Q8IZY2 2146 aa20.11■□□□□ 0.81
TPM4-208ENST00000588410 MYO18AQ92614 2054 aaKnown RBP20.11■□□□□ 0.81
TPM4-208ENST00000588410 A0A1B0GTW7 788 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 DRGXA6NNA5 263 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 E9PAM4 449 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 ARHGAP33O14559 1287 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 SRGAP2O75044 1071 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 KCNK5O95279 499 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 KRT3P12035 628 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 TPM4P67936 248 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 KRT83P78385 493 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 CST6Q15828 149 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 CDO1Q16878 200 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 KLHL40Q2TBA0 621 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 USP30Q70CQ3 517 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 PHF13Q86YI8 300 aaPredicted RBP20.1■□□□□ 0.81
TPM4-208ENST00000588410 STK40Q8N2I9 435 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 ZCCHC9Q8N567 271 aaKnown RBP20.1■□□□□ 0.81
TPM4-208ENST00000588410 OMDQ99983 421 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 C6orf106Q9H6K1 298 aaPredicted RBP20.1■□□□□ 0.81
TPM4-208ENST00000588410 TMPRSS4Q9NRS4 437 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 FBXL12Q9NXK8 326 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 EIF2B4Q9UI10 523 aaKnown RBP20.1■□□□□ 0.81
TPM4-208ENST00000588410 DCHS1Q96JQ0 3298 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 SPAG17Q6Q759 2223 aa20.1■□□□□ 0.81
TPM4-208ENST00000588410 ANKRD62A6NC57 917 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 I6L893 689 aaPredicted RBP20.09■□□□□ 0.81
TPM4-208ENST00000588410 RNASEH2AO75792 299 aaKnown RBP20.09■□□□□ 0.81
TPM4-208ENST00000588410 ENDOD1O94919 500 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 SERPINC1P01008 464 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 PTMSP20962 102 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 PSMD8P48556 350 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 NOVA1P51513 510 aaKnown RBP20.09■□□□□ 0.81
TPM4-208ENST00000588410 ELAVL3Q14576 367 aaKnown RBP20.09■□□□□ 0.81
TPM4-208ENST00000588410 CCDC14Q49A88 953 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 ALFQ53S48 1182 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 C6orf118Q5T5N4 469 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 BNIPLQ7Z465 357 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 TFAP2DQ7Z6R9 452 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 SETD3Q86TU7 594 aaPredicted RBP20.09■□□□□ 0.81
TPM4-208ENST00000588410 ZNF683Q8IZ20 524 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 OR52K2Q8NGK3 314 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 JOSD2Q8TAC2 188 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 PTPRN2Q92932 1015 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 ALG14Q96F25 216 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 C2orf49Q9BVC5 232 aaPredicted RBP20.09■□□□□ 0.81
TPM4-208ENST00000588410 MPP6Q9NZW5 540 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 MYO6Q9UM54 1294 aa20.09■□□□□ 0.81
TPM4-208ENST00000588410 SYCE3A1L190 88 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms