RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 SOWAHCQ53LP3 525 aaPredicted RBP17.38■□□□□ 0.37
SF3A2-203ENST00000587637 CXorf57Q6NSI4 855 aaKnown RBP17.38■□□□□ 0.37
SF3A2-203ENST00000587637 AZIN2Q96A70 460 aa17.38■□□□□ 0.37
SF3A2-203ENST00000587637 PRMT1Q99873 361 aaKnown RBP17.38■□□□□ 0.37
SF3A2-203ENST00000587637 OMDQ99983 421 aa17.38■□□□□ 0.37
SF3A2-203ENST00000587637 SLC4A5Q9BY07 1137 aa17.38■□□□□ 0.37
SF3A2-203ENST00000587637 GTPBP4Q9BZE4 634 aaKnown RBP17.38■□□□□ 0.37
SF3A2-203ENST00000587637 FAM204AQ9H8W3 233 aa17.38■□□□□ 0.37
SF3A2-203ENST00000587637 UBE2TQ9NPD8 197 aaPredicted RBP17.38■□□□□ 0.37
SF3A2-203ENST00000587637 TDRD6O60522 2096 aaKnown RBP17.38■□□□□ 0.37
SF3A2-203ENST00000587637 KNTC1P50748 2209 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 CAPN9O14815 690 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 RTN2O75298 545 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 PNMA6AP0CW24 399 aaPredicted RBP17.37■□□□□ 0.37
SF3A2-203ENST00000587637 GNA15P30679 374 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 MAT2AP31153 395 aaKnown RBP17.37■□□□□ 0.37
SF3A2-203ENST00000587637 RACK1P63244 317 aaKnown RBP17.37■□□□□ 0.37
SF3A2-203ENST00000587637 OTUD1Q5VV17 481 aaPredicted RBP17.37■□□□□ 0.37
SF3A2-203ENST00000587637 CCAR2Q8N163 923 aaKnown RBP17.37■□□□□ 0.37
SF3A2-203ENST00000587637 OR2T34Q8NGX1 318 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 OR14C36Q8NHC7 312 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 LRIG1Q96JA1 1093 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 TIGD1Q96MW7 591 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 CPXM1Q96SM3 734 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 ELF4Q99607 663 aaPredicted RBP17.37■□□□□ 0.37
SF3A2-203ENST00000587637 DDX50Q9BQ39 737 aaKnown RBP17.37■□□□□ 0.37
SF3A2-203ENST00000587637 SARDHQ9UL12 918 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 CNTN6Q9UQ52 1028 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 SNX10Q9Y5X0 201 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 ASXL3Q9C0F0 2248 aa17.37■□□□□ 0.37
SF3A2-203ENST00000587637 F5H5T6 163 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 RNF103O00237 685 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 P4HA2O15460 535 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 RNASEH1O60930 286 aaKnown RBP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 IL1BP01584 269 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 SRPRAP08240 638 aaKnown RBP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 PAK1Q13153 545 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 SUZ12Q15022 739 aaKnown RBP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 SMAD1Q15797 465 aaKnown RBP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 ARHGAP44Q17R89 818 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 RNF219Q5W0B1 726 aaPredicted RBP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 SPATS2Q86XZ4 545 aaKnown RBP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 DEFB106AQ8N104 65 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 EID2Q8N6I1 236 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 ZNF606Q8WXB4 792 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 SERAC1Q96JX3 654 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 CNDP2Q96KP4 475 aaKnown RBP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 MYOCQ99972 504 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 SRRTQ9BXP5 876 aaKnown RBP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 ADAMTS1Q9UHI8 967 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 FZD4Q9ULV1 537 aa17.36■□□□□ 0.37
SF3A2-203ENST00000587637 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.36■□□□□ 0.37
SF3A2-203ENST00000587637 LRRC72A6NJI9 287 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 ENC1O14682 589 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 SDC3O75056 442 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 EPHA8P29322 1005 aaPredicted RBP17.35■□□□□ 0.37
SF3A2-203ENST00000587637 USP8P40818 1118 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 BNIP3Q12983 259 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 EIF4EBP2Q13542 120 aaPredicted RBP17.35■□□□□ 0.37
SF3A2-203ENST00000587637 ARID5BQ14865 1188 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 ACAP1Q15027 740 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.35■□□□□ 0.37
SF3A2-203ENST00000587637 FAM183BPQ6ZVS7 135 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 Q6ZVU0 165 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 C14orf80Q86SX3 495 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 WDTC1Q8N5D0 677 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 C1orf131Q8NDD1 294 aaKnown RBP17.35■□□□□ 0.37
SF3A2-203ENST00000587637 SAP25Q8TEE9 199 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 FRS2Q8WU20 508 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 DCBLD2Q96PD2 775 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 IRX2Q9BZI1 471 aaPredicted RBP17.35■□□□□ 0.37
SF3A2-203ENST00000587637 POPDC2Q9HBU9 364 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 PLCB1Q9NQ66 1216 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 ANLNQ9NQW6 1124 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 DDIT4Q9NX09 232 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 SCML1Q9UN30 329 aa17.35■□□□□ 0.37
SF3A2-203ENST00000587637 TARSL2A2RTX5 802 aaKnown RBP17.34■□□□□ 0.37
SF3A2-203ENST00000587637 BNIP3LO60238 219 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 MOCS3O95396 460 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 ERBB2P04626 1255 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 GOT1P17174 413 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 TFE3P19532 575 aaPredicted RBP17.34■□□□□ 0.37
SF3A2-203ENST00000587637 SLC9A1P19634 815 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 CD38P28907 300 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 ACADSBP45954 432 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 ACADVLP49748 655 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 NXPH1P58417 271 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 CETN1Q12798 172 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 FBXL22Q6P050 247 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 TRIM65Q6PJ69 517 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 SND1Q7KZF4 910 aaKnown RBP eCLIP17.34■□□□□ 0.37
SF3A2-203ENST00000587637 TMEM110Q86TL2 294 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 CCDC117Q8IWD4 279 aaPredicted RBP17.34■□□□□ 0.37
SF3A2-203ENST00000587637 ZNF557Q8N988 423 aaPredicted RBP17.34■□□□□ 0.37
SF3A2-203ENST00000587637 ALG14Q96F25 216 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 BTN2A3PQ96KV6 586 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 SLC2A13Q96QE2 648 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 VANGL2Q9ULK5 521 aa17.34■□□□□ 0.37
SF3A2-203ENST00000587637 BICDL2A1A5D9 508 aa17.33■□□□□ 0.36
SF3A2-203ENST00000587637 KCNU1A8MYU2 1149 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms