RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 MBD1Q9UIS9 605 aaPredicted RBP12.78□□□□□ -0.36
ERCC2-207ENST00000586441 INTUQ9ULD6 942 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 SAR1BQ9Y6B6 198 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 IGHV1OR15-9A0A0B4J2B8 117 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.77□□□□□ -0.37
ERCC2-207ENST00000586441 GOLGA6L7A0A1B0GV03 622 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 MACROD2A1Z1Q3 448 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 DAB1O75553 588 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 ERBB2P04626 1255 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 TUBBP07437 444 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 PRLRP16471 622 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 WASP42768 502 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
ERCC2-207ENST00000586441 PLK1P53350 603 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 TAF5Q15542 800 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 C5orf22Q49AR2 442 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 ZC3H12AQ5D1E8 599 aaKnown RBP12.77□□□□□ -0.37
ERCC2-207ENST00000586441 BRMS1LQ5PSV4 323 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 MBLAC2Q68D91 279 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 OR6B2Q6IFH4 312 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 TRIM72Q6ZMU5 477 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 FAM183BPQ6ZVS7 135 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 CYP2U1Q7Z449 544 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 ERICH1Q86X53 443 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 TMPRSS6Q8IU80 811 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 PASD1Q8IV76 773 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 MFN1Q8IWA4 741 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 CADM4Q8NFZ8 388 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 CEP76Q8TAP6 659 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 ADAM32Q8TC27 787 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 ZNF419Q96HQ0 510 aaPredicted RBP12.77□□□□□ -0.37
ERCC2-207ENST00000586441 PRICKLE1Q96MT3 831 aaPredicted RBP12.77□□□□□ -0.37
ERCC2-207ENST00000586441 NPY6RQ99463 290 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 PRMT1Q99873 361 aaKnown RBP12.77□□□□□ -0.37
ERCC2-207ENST00000586441 DDIT4Q9NX09 232 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 KIAA1522Q9P206 1035 aaPredicted RBP12.77□□□□□ -0.37
ERCC2-207ENST00000586441 STAP1Q9ULZ2 295 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 INVSQ9Y283 1065 aa12.77□□□□□ -0.37
ERCC2-207ENST00000586441 TNRC6BQ9UPQ9 1833 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 A0A087X0T9 212 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CTAGE15A4D2H0 777 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 F5H5T6 163 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 TM4SF5O14894 197 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 KHNYNO15037 678 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 LUC7L3O95232 432 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 MOCS3O95396 460 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CYP1A1P04798 512 aaPredicted RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 EPHX1P07099 455 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 SRPRAP08240 638 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 FAM228BP0C875 321 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 TCP1P17987 556 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 TACR2P21452 398 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 DHPSP49366 369 aaPredicted RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CXCR3P49682 368 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 SGSHP51688 502 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 RPS24P62847 133 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CDR2Q01850 454 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 LMAN2Q12907 356 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CDH18Q13634 790 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 PTPRNQ16849 979 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 ERCC6LQ2NKX8 1250 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 SLC25A52Q3SY17 297 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 AASDHQ4L235 1098 aaPredicted RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 RABGAP1LQ5R372 815 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 LYSMD4Q5XG99 296 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 SLC23A3Q6PIS1 610 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 ZNF571Q7Z3V5 609 aaPredicted RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 NOP9Q86U38 636 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CTAGE6Q86UF2 777 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 OR2T3Q8NH03 318 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 PRCCQ92733 491 aaPredicted RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 C1orf74Q96LT6 269 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 MKRN2Q9H000 416 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 FAM204AQ9H8W3 233 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 WSB2Q9NYS7 404 aaPredicted RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 ADAMTS1Q9UHI8 967 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 NOCTQ9UK39 431 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 PILRBQ9UKJ0 227 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 SCML1Q9UN30 329 aa12.76□□□□□ -0.37
ERCC2-207ENST00000586441 CNOT1A5YKK6 2376 aaKnown RBP12.76□□□□□ -0.37
ERCC2-207ENST00000586441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 A0A1B0GVM2 712 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 TCAF2A6NFQ2 919 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 H0Y626 953 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 M0QYT0 321 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 PNMA6AP0CW24 399 aaPredicted RBP12.75□□□□□ -0.37
ERCC2-207ENST00000586441 MMP8P22894 467 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 PRKCHP24723 683 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 CD6P30203 668 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 CD70P32970 193 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 COPAP53621 1224 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 ST8SIA6P61647 398 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 NOMO3P69849 1222 aa12.75□□□□□ -0.37
ERCC2-207ENST00000586441 RPL6Q02878 288 aaKnown RBP12.75□□□□□ -0.37
ERCC2-207ENST00000586441 SULT2A1Q06520 285 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms