RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 FAM234BA2RU67 622 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SYNDIG1LA6NDD5 238 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MYADML2A6NDP7 307 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 K7ENM7 598 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CLGNO14967 610 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 STAM2O75886 525 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PIAS2O75928 621 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TSPAN9O75954 239 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CDKL5O76039 1030 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 NDST3O95803 873 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CHEK2O96017 543 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 A1BGP04217 495 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SPARCP09486 303 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CETPP11597 493 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 EIF2S2P20042 333 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CHMP24386 653 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 NFKBIAP25963 317 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ATP6V1E1P36543 226 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CHAF1BQ13112 559 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CBFBQ13951 182 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 NFIL3Q16649 462 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SPECC1Q5M775 1068 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CFAP161Q6P656 301 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SHQ1Q6PI26 577 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MTHFD1LQ6UB35 978 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SMIM5Q71RC9 77 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 HEATR4Q86WZ0 1026 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 FSTL5Q8N475 847 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 IL31RAQ8NI17 732 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D15Q8TC07 691 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 DENND1AQ8TEH3 1009 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SPSB4Q96A44 273 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ZBED3Q96IU2 234 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MAELQ96JY0 434 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CNDP2Q96KP4 475 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 C12orf42Q96LP6 360 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 WDR11Q9BZH6 1224 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 C11orf54Q9H0W9 315 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CCDC68Q9H2F9 335 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 EPS8L2Q9H6S3 715 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 DCTPP1Q9H773 170 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SYNCQ9H7C4 482 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TCP11L1Q9NUJ3 509 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TRPS1Q9UHF7 1281 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF112Q9UJU3 913 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM5Q9Y2B1 443 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MROH7-TTC4A0A0A0MT08 1334 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MROH7Q68CQ1 1323 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 FOCADQ5VW36 1801 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 LOC102723971A0A1B0GUV8 181 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 A0A1B0GVC2 190 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 E7ENX8 843 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PSMD9O00233 223 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PEX12O00623 359 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 RNF8O76064 485 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 FGF18O76093 207 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 BAIAP3O94812 1187 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 UFL1O94874 794 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SGPL1O95470 568 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC25A27O95847 323 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TTLL1O95922 423 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PFKMP08237 780 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 HDCP19113 662 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 AGFG1P52594 562 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TAP2Q03519 686 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 UBE3AQ05086 875 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 FOXO1Q12778 655 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PPIL2Q13356 520 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SPARCL1Q14515 664 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CCDC96Q2M329 555 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MGAT5BQ3V5L5 792 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TTC39AQ5SRH9 613 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SFRP4Q6FHJ7 346 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF529Q6P280 563 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 RAB11FIP2Q7L804 512 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CHD1LQ86WJ1 897 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CREBRFQ8IUR6 639 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 LURAP1LQ8IV03 231 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 BCL6BQ8N143 479 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 OR8H2Q8N162 312 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 C17orf53Q8N3J3 647 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 FAM46DQ8NEK8 389 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 OR7D4Q8NG98 312 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 STYXQ8WUJ0 223 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SNX33Q8WV41 574 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SECISBP2LQ93073 1101 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SMARCE1Q969G3 411 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ZUFSPQ96AP4 578 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 GBP5Q96PP8 586 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 DPCDQ9BVM2 203 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PCDHAC1Q9H158 963 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SERHL2Q9H4I8 314 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CNOT7Q9UIV1 285 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SHOC2Q9UQ13 582 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CAMK2AQ9UQM7 478 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 GPR75-ASB3A0A0A6YYF3 556 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 C2orf78A6NCI8 922 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TRIAP1O43715 76 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ECE2O60344 883 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms