RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 RALYQ9UKM9 306 aaKnown RBP21.07■□□□□ 0.96
TOP3A-219ENST00000584887 VANGL2Q9ULK5 521 aa21.07■□□□□ 0.96
TOP3A-219ENST00000584887 AKAP13Q12802 2813 aa21.07■□□□□ 0.96
TOP3A-219ENST00000584887 CHD6Q8TD26 2715 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 FOXN3O00409 490 aaPredicted RBP21.06■□□□□ 0.96
TOP3A-219ENST00000584887 FLRT2O43155 660 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 DAB1O75553 588 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 IL1BP01584 269 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 VAV1P15498 845 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 CCT8P50990 548 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 IL9RQ01113 521 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 RAPGEF1Q13905 1077 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 ARID5BQ14865 1188 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 SUZ12Q15022 739 aaKnown RBP21.06■□□□□ 0.96
TOP3A-219ENST00000584887 PTPN20Q4JDL3 420 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 KCNT1Q5JUK3 1230 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 OLFML1Q6UWY5 402 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 ADAMTS14Q8WXS8 1223 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 SLC6A18Q96N87 628 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 ACE2Q9BYF1 805 aaPredicted RBP21.06■□□□□ 0.96
TOP3A-219ENST00000584887 AASDHPPTQ9NRN7 309 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 CHMP5Q9NZZ3 219 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 BTBD3Q9Y2F9 522 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 PCDHGB2Q9Y5G2 931 aa21.06■□□□□ 0.96
TOP3A-219ENST00000584887 FAM208BQ5VWN6 2430 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 H0Y8X5 98 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 M0QYT0 321 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 ADH1BP00325 375 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 CLCN1P35523 988 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 IRAK1P51617 712 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 RNASE9P60153 205 aaKnown RBP21.05■□□□□ 0.96
TOP3A-219ENST00000584887 SLC6A3Q01959 620 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 SULT2A1Q06520 285 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 EIF4EBP2Q13542 120 aaPredicted RBP21.05■□□□□ 0.96
TOP3A-219ENST00000584887 SLC12A1Q13621 1099 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 AUHQ13825 339 aaKnown RBP21.05■□□□□ 0.96
TOP3A-219ENST00000584887 DPCR1Q3MIW9 517 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 ACCSLQ4AC99 568 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 CCDC157Q569K6 752 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 SLCO6A1Q86UG4 719 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 AADATQ8N5Z0 425 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 OR2T34Q8NGX1 318 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 OR14C36Q8NHC7 312 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 IGSF8Q969P0 613 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 FAM129BQ96TA1 746 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 CDC6Q99741 560 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 ORAI3Q9BRQ5 295 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 SIK2Q9H0K1 926 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 NDST4Q9H3R1 872 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 FZD4Q9ULV1 537 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 TMEM131Q92545 1883 aa21.05■□□□□ 0.96
TOP3A-219ENST00000584887 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.04■□□□□ 0.96
TOP3A-219ENST00000584887 A0A1W2PPC4 97 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 GOT1P17174 413 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 C5AR1P21730 350 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 OXCT1P55809 520 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 RACK1P63244 317 aaKnown RBP21.04■□□□□ 0.96
TOP3A-219ENST00000584887 ZNF177Q13360 481 aaPredicted RBP21.04■□□□□ 0.96
TOP3A-219ENST00000584887 ELAVL3Q14576 367 aaKnown RBP21.04■□□□□ 0.96
TOP3A-219ENST00000584887 VWA3BQ502W6 1294 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 CXorf57Q6NSI4 855 aaKnown RBP21.04■□□□□ 0.96
TOP3A-219ENST00000584887 SND1Q7KZF4 910 aaKnown RBP eCLIP21.04■□□□□ 0.96
TOP3A-219ENST00000584887 SLC26A9Q7LBE3 791 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 GLRX5Q86SX6 157 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 PTPRN2Q92932 1015 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 TUBGCP2Q9BSJ2 902 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 SLC25A13Q9UJS0 675 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 VPS28Q9UK41 221 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 HS3ST4Q9Y661 456 aa21.04■□□□□ 0.96
TOP3A-219ENST00000584887 PLK4O00444 970 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 BNIP3LO60238 219 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 PAGE1O75459 146 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 ATXN1LP0C7T5 689 aaKnown RBP21.03■□□□□ 0.96
TOP3A-219ENST00000584887 CTSKP43235 329 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 ADPRHP54922 357 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 BPIFB4P59827 614 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 DRAP1Q14919 205 aaPredicted RBP21.03■□□□□ 0.96
TOP3A-219ENST00000584887 TAF3Q5VWG9 929 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.03■□□□□ 0.96
TOP3A-219ENST00000584887 FAM71AQ8IYT1 594 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 ADAMTS1Q9UHI8 967 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 DACH1Q9UI36 760 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 FHOD1Q9Y613 1164 aa21.03■□□□□ 0.96
TOP3A-219ENST00000584887 NYNRINQ9P2P1 1898 aaKnown RBP21.03■□□□□ 0.96
TOP3A-219ENST00000584887 SRRM3A6NNA2 597 aaPredicted RBP21.02■□□□□ 0.96
TOP3A-219ENST00000584887 NOS2P35228 1153 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 SULT1E1P49888 294 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 KCNJ12Q14500 433 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 POM121L1PQ3SYA9 428 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 MIIPQ5JXC2 388 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 PRAMEF14Q5SWL7 426 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 DSG4Q86SJ6 1040 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 C14orf80Q86SX3 495 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 TMEM35BQ8NCS4 154 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 OR52K2Q8NGK3 314 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 BAHD1Q8TBE0 780 aaPredicted RBP21.02■□□□□ 0.96
TOP3A-219ENST00000584887 OR8D1Q8WZ84 308 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 SKA1Q96BD8 255 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 SPAG5Q96R06 1193 aa21.02■□□□□ 0.96
TOP3A-219ENST00000584887 PPP1R9BQ96SB3 815 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms