RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 STARD3Q14849 445 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 PITRM1Q5JRX3 1037 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 TTC39BQ5VTQ0 682 aaPredicted RBP21.39■■□□□ 1.01
TOP3A-218ENST00000584669 ZNF683Q8IZ20 524 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 MCOLN2Q8IZK6 566 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 APCDD1Q8J025 514 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 C3orf20Q8ND61 904 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 CPLX3Q8WVH0 158 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 TTC17Q96AE7 1141 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 MRGPRX1Q96LB2 322 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 NUP58Q9BVL2 599 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 XPO4Q9C0E2 1151 aaKnown RBP21.39■■□□□ 1.01
TOP3A-218ENST00000584669 TMEM245Q9H330 911 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 CD93Q9NPY3 652 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 KIAA1522Q9P206 1035 aaPredicted RBP21.39■■□□□ 1.01
TOP3A-218ENST00000584669 PLA2G4CQ9UP65 541 aa21.39■■□□□ 1.01
TOP3A-218ENST00000584669 CHD5Q8TDI0 1954 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 IGHV1OR15-9A0A0B4J2B8 117 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 CDX4O14627 284 aaPredicted RBP21.38■■□□□ 1.01
TOP3A-218ENST00000584669 ZNF217O75362 1048 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 ENDOD1O94919 500 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 ATP5BP06576 529 aaKnown RBP21.38■■□□□ 1.01
TOP3A-218ENST00000584669 EPHX1P07099 455 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 DPP6P42658 865 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 CTSOP43234 321 aaPredicted RBP21.38■■□□□ 1.01
TOP3A-218ENST00000584669 KLHL30Q0D2K2 578 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 E2F5Q15329 346 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 SPDYCQ5MJ68 293 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 CXorf57Q6NSI4 855 aaKnown RBP21.38■■□□□ 1.01
TOP3A-218ENST00000584669 WDR59Q6PJI9 974 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 RNF214Q8ND24 703 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 OR52K2Q8NGK3 314 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 MKRN2Q9H000 416 aaKnown RBP21.38■■□□□ 1.01
TOP3A-218ENST00000584669 FSCN3Q9NQT6 498 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 PILRBQ9UKJ0 227 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 PAXBP1Q9Y5B6 917 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 ASCC3Q8N3C0 2202 aaKnown RBP21.38■■□□□ 1.01
TOP3A-218ENST00000584669 NUMA1Q14980 2115 aa21.38■■□□□ 1.01
TOP3A-218ENST00000584669 A0A1W2PQJ5 194 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 SIGLEC16A6NMB1 481 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 SYNCRIPO60506 623 aaKnown RBP21.37■■□□□ 1.01
TOP3A-218ENST00000584669 NDUFS2O75306 463 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 CNTN5O94779 1100 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 ENGP17813 658 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 RRM1P23921 792 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 MZF1P28698 734 aaPredicted RBP21.37■■□□□ 1.01
TOP3A-218ENST00000584669 PTPN9P43378 593 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 ZNF33AQ06730 810 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 ZNF252P-AS1Q0IIN9 211 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 PLEKHG6Q3KR16 790 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 C5orf22Q49AR2 442 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 ARTNQ5T4W7 220 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 DNAJC24Q6P3W2 148 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 MYO19Q96H55 970 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 HSPA12BQ96MM6 686 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 GTPBP2Q9BX10 602 aaKnown RBP21.37■■□□□ 1.01
TOP3A-218ENST00000584669 MTG2Q9H4K7 406 aa21.37■■□□□ 1.01
TOP3A-218ENST00000584669 DDX3XO00571 662 aaKnown RBP eCLIP21.36■■□□□ 1.012e-11■■■□□ 16.2
TOP3A-218ENST00000584669 ATMINO43313 823 aaPredicted RBP21.36■■□□□ 1.01
TOP3A-218ENST00000584669 GPD1P21695 349 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 COPAP53621 1224 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 ATXN3P54252 364 aaPredicted RBP21.36■■□□□ 1.01
TOP3A-218ENST00000584669 RPL7AP62424 266 aaKnown RBP21.36■■□□□ 1.01
TOP3A-218ENST00000584669 ST3GAL2Q16842 350 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 ALFQ53S48 1182 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 FAM172AQ8WUF8 416 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 MRGPRX3Q96LB0 322 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 MCEEQ96PE7 176 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 PRDM16Q9HAZ2 1276 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 TMEM51Q9NW97 253 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 CAPN11Q9UMQ6 739 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 ERVW-1Q9UQF0 538 aa21.36■■□□□ 1.01
TOP3A-218ENST00000584669 ADAMTS9Q9P2N4 1935 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-218ENST00000584669 MOCS3O95396 460 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 ASLP04424 464 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 GYPCP04921 128 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 HDAC4P56524 1084 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 GFPT1Q06210 699 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-218ENST00000584669 ZNF177Q13360 481 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-218ENST00000584669 CAMK2GQ13555 558 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-218ENST00000584669 DUOXA1Q1HG43 343 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 PPP1R15BQ5SWA1 713 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 STRADAQ7RTN6 431 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 CACUL1Q86Y37 369 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 TMPRSS6Q8IU80 811 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 DEFB124Q8NES8 71 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 CENPIQ92674 756 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-218ENST00000584669 C1orf74Q96LT6 269 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 HAPLN3Q96S86 360 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 MAGEB5Q9BZ81 275 aa21.35■■□□□ 1.01
TOP3A-218ENST00000584669 CACNA1EQ15878 2313 aa21.34■■□□□ 1.01
TOP3A-218ENST00000584669 E9PAM4 449 aa21.34■■□□□ 1.01
TOP3A-218ENST00000584669 CCP110O43303 1012 aa21.34■■□□□ 1.01
TOP3A-218ENST00000584669 SRGAP2O75044 1071 aa21.34■■□□□ 1.01
TOP3A-218ENST00000584669 HOXD12P35452 270 aa21.34■■□□□ 1.01
TOP3A-218ENST00000584669 CDH4P55283 916 aa21.34■■□□□ 1.01
TOP3A-218ENST00000584669 ZBED6P86452 979 aa21.34■■□□□ 1.01
TOP3A-218ENST00000584669 FOXC1Q12948 553 aa21.34■■□□□ 1.01
TOP3A-218ENST00000584669 SLC12A1Q13621 1099 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms