RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NIPA2Q8N8Q9 360 aa13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 ZNF557Q8N988 423 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 HJURPQ8NCD3 748 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 LRRN4CLQ8ND94 238 aa13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 NTAN1Q96AB6 310 aa13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 RHOXF2Q9BQY4 288 aa13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 BBS2Q9BXC9 721 aa13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 TKTL2Q9H0I9 626 aa13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 RAB21Q9UL25 225 aa13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 NDRG2Q9UN36 371 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 PACSIN2Q9UNF0 486 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-220ENST00000581737 MIA3Q5JRA6 1907 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 F5H5T6 163 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 KRIT1O00522 736 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 GDF9O60383 454 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 PAGE1O75459 146 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 GJA4P35212 333 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 MAGEA9P43362 315 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 OGDHQ02218 1023 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 GPS2Q13227 327 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 SRSF5Q13243 272 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 GAS6Q14393 721 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 LONRF2Q1L5Z9 754 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 FAM133BQ5BKY9 247 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 RABGAP1LQ5R372 815 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 MPP7Q5T2T1 576 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 RHBDF2Q6PJF5 856 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 ZNF852Q6ZMS4 543 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 MAATS1Q7Z4T9 603 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 TMEM25Q86YD3 366 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 CCDC117Q8IWD4 279 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 RHOT1Q8IXI2 618 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 IFT20Q8IY31 132 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 HNRNPLLQ8WVV9 542 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 TSC1Q92574 1164 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 XPO6Q96QU8 1125 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 HAPLN3Q96S86 360 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 PARD6BQ9BYG5 372 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 ADAM33Q9BZ11 813 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 CALCOCO1Q9P1Z2 691 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 MAP1BP46821 2468 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 KIAA1549LQ6ZVL6 1849 aa13.9□□□□□ -0.18
CSNK1D-220ENST00000581737 NEDD8-MDP1E9PL57 170 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 SLC30A4O14863 429 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 PRPSAP2O60256 369 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 CACNG3O60359 315 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 PENKP01210 267 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 TYRP14679 529 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 TACR2P21452 398 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 ADRA1BP35368 520 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 PCK1P35558 622 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 SATB1Q01826 763 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 ZNF252P-AS1Q0IIN9 211 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 SCAPQ12770 1279 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 MS4A13Q5J8X5 152 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 EFHC2Q5JST6 749 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 SH3PXD2AQ5TCZ1 1133 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 RAP1GAP2Q684P5 730 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 NADSYN1Q6IA69 706 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 SCYL2Q6P3W7 929 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 LRRC31Q6UY01 552 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 TPGS1Q6ZTW0 290 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 NOA1Q8NC60 698 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 TTC8Q8TAM2 541 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 DDI1Q8WTU0 396 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 C1orf74Q96LT6 269 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 NELL2Q99435 816 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 SLC2A11Q9BYW1 496 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 CHRDQ9H2X0 955 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 HOMER3Q9NSC5 361 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 C2orf42Q9NWW7 574 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 STIM2Q9P246 746 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 GMEB2Q9UKD1 530 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 PCDHA3Q9Y5H8 950 aa13.89□□□□□ -0.19
CSNK1D-220ENST00000581737 OTOL1A6NHN0 477 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 GFRA2O00451 464 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 DDX3YO15523 660 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 HRO43593 1189 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 CLCN6P51797 869 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 NAA30Q147X3 362 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 HADHQ16836 314 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 PIK3R6Q5UE93 754 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 FYB2Q5VWT5 728 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 RFWD3Q6PCD5 774 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 NUDT18Q6ZVK8 323 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 PSTKQ8IV42 348 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 LGI2Q8N0V4 545 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 FAM3CQ92520 227 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 RBM41Q96IZ5 413 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 SIK2Q9H0K1 926 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 OSBPL2Q9H1P3 480 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 ANKZF1Q9H8Y5 726 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 DDX56Q9NY93 547 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 DEC1Q9P2X7 70 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms