RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TSPAN3O60637 253 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 ENO1P06733 434 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 PRPH2P23942 346 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 IDUAP35475 653 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 B4GALNT1Q00973 533 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 DMWDQ09019 674 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 TBX2Q13207 712 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 SUPT20HL1Q3ZLR7 823 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 INTS11Q5TA45 600 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 DHRS13Q6UX07 377 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 TEX19Q8NA77 164 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 MPP4Q96JB8 637 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 PPM1MQ96MI6 270 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 ASB2Q96Q27 587 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 SENP7Q9BQF6 1050 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 HDHD5Q9BXW7 423 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 MAF1Q9H063 256 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 ZNF69Q9UC07 566 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 SAC3D1A6NKF1 404 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 A6NLC8 198 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 TMEM232C9JQI7 657 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 RRHO14718 337 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 DSCR3O14972 297 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 EPB41L2O43491 1005 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 CNTN5O94779 1100 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 CHRM5P08912 532 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 POLGP54098 1239 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 VAMP2P63027 116 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 ALKBH1Q13686 389 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 ANXA2RQ3ZCQ2 193 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 GLE1Q53GS7 698 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 RUNDC3AQ59EK9 446 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 ZNF66Q6ZN08 573 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 TFAP2DQ7Z6R9 452 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 ENDOVQ8N8Q3 282 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 C5orf34Q96MH7 638 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 TRIM31Q9BZY9 425 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 STN1Q9H668 368 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 THAP1Q9NVV9 213 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 ELOVL5Q9NYP7 299 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 PNMA2Q9UL42 364 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 AFG3L2Q9Y4W6 797 aa5.17□□□□□ -1.58
SMCHD1-205ENST00000581383 NPIPB13A6NJU9 1138 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 NPIPB5A8MRT5 1133 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 NPIPB4C9JG80 1138 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 J3KRW8 73 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 PEX12O00623 359 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 PPEF2O14830 753 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 HNRNPA1P09651 372 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 WEE2P0C1S8 567 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 CYP2A6P11509 494 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 AVPR2P30518 371 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 LIFRP42702 1097 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 THOC5Q13769 683 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 RABEP1Q15276 862 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 RALBP1Q15311 655 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 SEC23BQ15437 767 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 WDR45BQ5MNZ6 344 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 ANO7Q6IWH7 933 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 C11orf87Q6NUJ2 197 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 RETSATQ6NUM9 610 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 DENND1BQ6P3S1 775 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 MTFR2Q6P444 385 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 TMEM200AQ86VY9 491 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 RFX6Q8HWS3 928 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 VPS52Q8N1B4 723 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 ATP2A3Q93084 1043 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 RRP36Q96EU6 259 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 MASTLQ96GX5 879 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 EFHD1Q9BUP0 239 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 GATA5Q9BWX5 397 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 SLC26A6Q9BXS9 759 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 CTDSP1Q9GZU7 261 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 ACAD9Q9H845 621 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 UBN1Q9NPG3 1134 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 KLQ9UEF7 1012 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 SLC25A13Q9UJS0 675 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 HSF4Q9ULV5 492 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 MAFFQ9ULX9 164 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 BTBD3Q9Y2F9 522 aa5.16□□□□□ -1.58
SMCHD1-205ENST00000581383 SYN3O14994 580 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 DHX16O60231 1041 aaKnown RBP5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 ATP1A3P13637 1013 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 TNNT1P13805 278 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 ARSAP15289 507 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 TGM2P21980 687 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 PGM1P36871 562 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 NR1H2P55055 460 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 YPEL5P62699 121 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 MTA1Q13330 715 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 FHL1Q13642 323 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 RHPN2Q8IUC4 686 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 PIGKQ92643 395 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 HMCESQ96FZ2 354 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 FCRL5Q96RD9 977 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms