RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 LGMNQ99538 433 aa11.33□□□□□ -0.6
SKA2-206ENST00000581068 SLC39A8Q9C0K1 460 aa11.33□□□□□ -0.6
SKA2-206ENST00000581068 ARFGAP3Q9NP61 516 aa11.33□□□□□ -0.6
SKA2-206ENST00000581068 TDP1Q9NUW8 608 aa11.33□□□□□ -0.6
SKA2-206ENST00000581068 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.6
SKA2-206ENST00000581068 ZFP37Q9Y6Q3 630 aaPredicted RBP11.33□□□□□ -0.6
SKA2-206ENST00000581068 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 TYW5A2RUC4 315 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 ARHGAP42A6NI28 874 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 TRDMT1O14717 391 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 CLDN11O75508 207 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 SEC31AO94979 1220 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 GLP2RO95838 553 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 VAV1P15498 845 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 TCF3P15923 654 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 HOXB8P17481 243 aaPredicted RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 FSHRP23945 695 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 WEE1P30291 646 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 OR1E1P30953 314 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 CHKAP35790 457 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 PAPOLAP51003 745 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 ITGA8P53708 1063 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 EMBQ6PCB8 327 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 ZDHHC24Q6UX98 284 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 GSPT2Q8IYD1 628 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 CPXM2Q8N436 756 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 ATPAF2Q8N5M1 289 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 HJURPQ8NCD3 748 aaPredicted RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 AENQ8WTP8 325 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 LRRN4Q8WUT4 740 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 ING5Q8WYH8 240 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 USP13Q92995 863 aaPredicted RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 TMA16Q96EY4 203 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 P2RY11Q96G91 374 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 SMG9Q9H0W8 520 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 ZDHHC18Q9NUE0 388 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 NDFIP2Q9NV92 336 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 MTRF1LQ9UGC7 380 aaKnown RBP11.32□□□□□ -0.6
SKA2-206ENST00000581068 ATG2AQ2TAZ0 1938 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 DENND4CQ5VZ89 1909 aa11.32□□□□□ -0.6
SKA2-206ENST00000581068 A0A0A0MRY4 1105 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 A0A1B0GVM2 712 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 TCAF2A6NFQ2 919 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 RASA4BC9J798 803 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 SMAPO00193 183 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 RNF103O00237 685 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 GFRA2O00451 464 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 LINC01565O15544 149 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 RASA4O43374 803 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 RAMP2O60895 175 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 TBL1XO60907 577 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 ECHS1P30084 290 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 RPS24P62847 133 aaKnown RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 MLLT1Q03111 559 aaPredicted RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 POLD3Q15054 466 aaPredicted RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 PARP15Q460N3 678 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 MPPE1Q53F39 396 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 ANKRD20A2Q5SQ80 823 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 BEND6Q5SZJ8 279 aaPredicted RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 C6orf118Q5T5N4 469 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 ANKRD20A1Q5TYW2 823 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 ANKRD20A3Q5VUR7 823 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 TIGD7Q6NT04 549 aaPredicted RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 HIBCHQ6NVY1 386 aaPredicted RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 CIR1Q86X95 450 aaPredicted RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 BBS7Q8IWZ6 715 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 PPIL6Q8IXY8 311 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 TTC16Q8NEE8 873 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 CAVIN3Q969G5 261 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 ZSWIM3Q96MP5 696 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 PRICKLE1Q96MT3 831 aaPredicted RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 SPATA13Q96N96 652 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 VAT1Q99536 393 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 FOXP3Q9BZS1 431 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 TSPYL1Q9H0U9 437 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 MAGEH1Q9H213 219 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 NEUROG2Q9H2A3 272 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 NOL6Q9H6R4 1146 aaKnown RBP11.31□□□□□ -0.6
SKA2-206ENST00000581068 KIF9Q9HAQ2 790 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 SEPT10Q9P0V9 454 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 TBC1D14Q9P2M4 693 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 TRHDEQ9UKU6 1024 aa11.31□□□□□ -0.6
SKA2-206ENST00000581068 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 MATN3O15232 486 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 MAFKO60675 156 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 OPHN1O60890 802 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 RHOCP08134 193 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 FAM153BP0C7A2 387 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 POU3F3P20264 500 aaPredicted RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 FDFT1P37268 417 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 TNNT3P45378 269 aaPredicted RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 SGSHP51688 502 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms