RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CCDC187A0A096LP49 1063 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3FA6NER0 549 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3LB9A6J9 549 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 SLC26A4O43511 780 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 MAGEC1O60732 1142 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 GCNT3O95395 438 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3HP0C7X1 549 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 RNF224P0DH78 156 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 ELAVL4P26378 380 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 PSMD8P48556 350 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 KIF11P52732 1056 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 KCNMA1Q12791 1236 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 SFSWAPQ12872 951 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 MORC3Q14149 939 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 DRAP1Q14919 205 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 NCAPHQ15003 741 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 SURF1Q15526 300 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 CDKN3Q16667 212 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 POM121L1PQ3SYA9 428 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 PERM1Q5SV97 790 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3GQ6DHY5 549 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3CQ6IPX1 549 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 RBM44Q6ZP01 1051 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 EFL1Q7Z2Z2 1120 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 CCDC186Q7Z3E2 898 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 PRPF39Q86UA1 669 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3Q8IZP1 549 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 C12orf29Q8N999 325 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TMEM145Q8NBT3 493 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 LARP4BQ92615 738 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TTC17Q96AE7 1141 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 MIB2Q96AX9 1013 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 DNAJC19Q96DA6 116 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 KLHDC7BQ96G42 594 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TNIP3Q96KP6 325 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 USP29Q9HBJ7 922 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 FAM49BQ9NUQ9 324 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 CLIC5Q9NZA1 410 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 SEL1LQ9UBV2 794 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 INTS6Q9UL03 887 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TPX2Q9ULW0 747 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 PCDHGA7Q9Y5G6 932 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 PCDHA5Q9Y5H7 936 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 USP3Q9Y6I4 520 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 CSMD1Q96PZ7 3565 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 CELSR1Q9NYQ6 3014 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 SLC12A8A0AV02 714 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 EME2A4GXA9 379 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 RCCD1A6NED2 376 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 ZNF233A6NK53 670 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 TTC34A8MYJ7 566 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 SCAMP1O15126 338 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 RTN2O75298 545 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 ATP5BP06576 529 aaKnown RBP7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 DLATP10515 647 aaKnown RBP7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 LIPCP11150 499 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 POLR2EP19388 210 aaKnown RBP7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 C5AR1P21730 350 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 ADORA2BP29275 332 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 CD97P48960 835 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 ZNF177Q13360 481 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 STAT4Q14765 748 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 ARID5BQ14865 1188 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 TRIP4Q15650 581 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 BMT2Q1RMZ1 405 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 HS1BP3Q53T59 392 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 SCARA5Q6ZMJ2 495 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 B3GNT8Q7Z7M8 397 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 C14orf80Q86SX3 495 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 TADA2BQ86TJ2 420 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 TRIM69Q86WT6 500 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 SYCP3Q8IZU3 236 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 SLC22A18ASQ8N1D0 253 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 CRYBG2Q8N1P7 616 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 STK40Q8N2I9 435 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 CALML4Q96GE6 196 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 AK8Q96MA6 479 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 NOX5Q96PH1 765 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 CGRRF1Q99675 332 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 MYOCQ99972 504 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 ADNPQ9H2P0 1102 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 VRTNQ9H8Y1 702 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 MARCH2Q9P0N8 246 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 STOML2Q9UJZ1 356 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 DMTF1Q9Y222 760 aa7.97□□□□□ -1.13
SMARCE1-217ENST00000580654 TARSL2A2RTX5 802 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 CPED1A4D0V7 1026 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 PRAMEF26H0Y7S4 382 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 PLD2O14939 933 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 PLRG1O43660 514 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 RNASEH1O60930 286 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 TCEA3O75764 348 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 FAM200BP0CF97 657 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ALPPL2P10696 532 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 RALAP11233 206 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 HGFP14210 728 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 TNNI1P19237 187 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 MZF1P28698 734 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms