RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 LRRC43Q8N309 656 aa17.97■□□□□ 0.47
TMCO1-207ENST00000580248 DEPDC1BQ8WUY9 529 aa17.97■□□□□ 0.47
TMCO1-207ENST00000580248 RNF34Q969K3 372 aa17.97■□□□□ 0.47
TMCO1-207ENST00000580248 RHOBTB2Q9BYZ6 727 aa17.97■□□□□ 0.47
TMCO1-207ENST00000580248 SMYD2Q9NRG4 433 aa17.97■□□□□ 0.47
TMCO1-207ENST00000580248 SLC17A7Q9P2U7 560 aa17.97■□□□□ 0.47
TMCO1-207ENST00000580248 DNAJB4Q9UDY4 337 aa17.97■□□□□ 0.47
TMCO1-207ENST00000580248 ZNF638Q14966 1978 aaKnown RBP17.97■□□□□ 0.47
TMCO1-207ENST00000580248 FNDC1Q4ZHG4 1894 aaPredicted RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 WDR27A2RRH5 827 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 I6L893 689 aaPredicted RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 KLF11O14901 512 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 RASSF9O75901 435 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 UBOX5O94941 541 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 AP2A1O95782 977 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 TROVE2P10155 538 aaKnown RBP eCLIP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 DNAJB2P25686 324 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 GARSP41250 739 aaKnown RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 GRIA1P42261 906 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 SKIV2L2P42285 1042 aaKnown RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 FRG1Q14331 258 aaKnown RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 SETDB1Q15047 1291 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 SPANXN3Q5MJ09 141 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 SPDYAQ5MJ70 313 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 FAM117BQ6P1L5 589 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 ACMSDQ8TDX5 336 aa17.96■□□□□ 0.47
TMCO1-207ENST00000580248 OXNAD1Q96HP4 312 aaPredicted RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 KLF6Q99612 283 aaPredicted RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 RC3H2Q9HBD1 1191 aaKnown RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 CXXC1Q9P0U4 656 aaPredicted RBP17.96■□□□□ 0.47
TMCO1-207ENST00000580248 IRAK2O43187 625 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 RFPL1O75677 317 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 ATP5HO75947 161 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 LRIG2O94898 1065 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 OAZ2O95190 189 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 ALDH2P05091 517 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 POLBP06746 335 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 CSH1P0DML2 217 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 CSH2P0DML3 217 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 EPHB2P29323 1055 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 OR1G1P47890 313 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 CASC4Q6P4E1 433 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 OTOAQ7RTW8 1153 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 HASPINQ8TF76 798 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 ARNTL2Q8WYA1 636 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 FUBP3Q96I24 572 aaKnown RBP eCLIP17.95■□□□□ 0.466e-6■□□□□ 9.8
TMCO1-207ENST00000580248 TMEM175Q9BSA9 504 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 GBA3Q9H227 469 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 SMOC2Q9H3U7 446 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 SLC40A1Q9NP59 571 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 MAGEB16A2A368 324 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 TNFRSF10BO14763 440 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 FGF10O15520 208 aaPredicted RBP17.95■□□□□ 0.46
TMCO1-207ENST00000580248 TGDSO95455 350 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 MGAT1P26572 445 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 GRIK1P39086 918 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 SLC5A3P53794 718 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 NIPAL4Q0D2K0 466 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 SF3A3Q12874 501 aaKnown RBP eCLIP17.95■□□□□ 0.46
TMCO1-207ENST00000580248 PPP2R5DQ14738 602 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 NFE2Q16621 373 aaPredicted RBP17.95■□□□□ 0.46
TMCO1-207ENST00000580248 DBN1Q16643 649 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 TEX44Q53QW1 395 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 FAM133BQ5BKY9 247 aaKnown RBP17.95■□□□□ 0.46
TMCO1-207ENST00000580248 STXBP5Q5T5C0 1151 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 TRMT10BQ6PF06 316 aaKnown RBP17.95■□□□□ 0.46
TMCO1-207ENST00000580248 FITM2Q8N6M3 262 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 RAB3IL1Q8TBN0 382 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 SPOCK2Q92563 424 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 TSGA13Q96PP4 275 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 SRPK1Q96SB4 655 aaKnown RBP17.95■□□□□ 0.46
TMCO1-207ENST00000580248 TMEM209Q96SK2 561 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 ZCWPW1Q9H0M4 648 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 MTIF3Q9H2K0 278 aaKnown RBP17.95■□□□□ 0.46
TMCO1-207ENST00000580248 LRRC40Q9H9A6 602 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 SLCO1B3Q9NPD5 702 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 PLLPQ9Y342 182 aa17.95■□□□□ 0.46
TMCO1-207ENST00000580248 COL4A6Q14031 1691 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 GJB5O95377 273 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 HOXC13P31276 330 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 CCR1P32246 355 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 NPY2RP49146 381 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 MGAT5Q09328 741 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 PRPSAP1Q14558 356 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 FBXW10Q5XX13 1052 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 CMTR2Q8IYT2 770 aaKnown RBP17.94■□□□□ 0.46
TMCO1-207ENST00000580248 NPWQ8N729 165 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 PHOSPHO2Q8TCD6 241 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 PPP1R2P1Q96PQ5 205 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 FAM111AQ96PZ2 611 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 CATSPERBQ9H7T0 1116 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 CASS4Q9NQ75 786 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 BFARQ9NZS9 450 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 HCSTQ9UBK5 93 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 SLC4A7Q9Y6M7 1214 aa17.94■□□□□ 0.46
TMCO1-207ENST00000580248 KCNK1O00180 336 aa17.93■□□□□ 0.46
TMCO1-207ENST00000580248 SYN3O14994 580 aa17.93■□□□□ 0.46
TMCO1-207ENST00000580248 ITGB1P05556 798 aa17.93■□□□□ 0.46
TMCO1-207ENST00000580248 CCNCP24863 283 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms