RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 THSD1Q9NS62 852 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 STIM2Q9P246 746 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 INTS6Q9UL03 887 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TTC34A8MYJ7 566 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PRAMEF26H0Y7S4 382 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ARHGAP6O43182 974 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 IL1BP01584 269 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ALPPL2P10696 532 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DUSP3P51452 185 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TBX4P57082 545 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DAOAP59103 153 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 YWHAEP62258 255 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 GABREP78334 506 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SULT2A1Q06520 285 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SLC12A1Q13621 1099 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 GOLGA7BQ2TAP0 167 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SETMARQ53H47 684 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PITRM1Q5JRX3 1037 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FAM46CQ5VWP2 391 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RESP18Q5W5W9 173 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TRIM69Q86WT6 500 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CARNMT1Q8N4J0 409 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FAM181AQ8N9Y4 354 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 OR4C6Q8NH72 309 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NDRG1Q92597 394 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CCDC47Q96A33 483 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FAM131CQ96AQ9 280 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 GRAMD1AQ96CP6 724 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CCDC97Q96F63 343 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NAF1Q96HR8 494 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SPAG5Q96R06 1193 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 USP29Q9HBJ7 922 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CPNE5Q9HCH3 593 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RAB20Q9NX57 234 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ARHGAP20Q9P2F6 1191 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CYTH4Q9UIA0 394 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 KIAA1257Q9ULG3 409 aa12.63□□□□□ -0.39
CDK5RAP3-216ENST00000579853 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TULP2O00295 520 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 KLK10O43240 276 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 OPA1O60313 960 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 USP12O75317 370 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 WISP1O95388 367 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MPOP05164 745 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CKMT1AP12532 417 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MZF1P28698 734 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SLC6A4P31645 630 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ME1P48163 572 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MXI1P50539 228 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PPP2CBP62714 309 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PPP2CAP67775 309 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NNTQ13423 1086 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CDCP2Q5VXM1 449 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 IGF2-ASQ6U949 168 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 STK40Q8N2I9 435 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TTC9Q92623 222 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PTPRN2Q92932 1015 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TATDN2Q93075 761 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 KLHDC7BQ96G42 594 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SERPINB11Q96P15 392 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PPP1R9BQ96SB3 815 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ABCG4Q9H172 646 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MMRN2Q9H8L6 949 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MYO9AB2RTY4 2548 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NBASA2RRP1 2371 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NEMP2A6NFY4 417 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TRIM38O00635 465 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PLRG1O43660 514 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SDC3O75056 442 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 LUC7L3O95232 432 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 LTFP02788 710 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 VDRP11473 427 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CD19P15391 556 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DGKAP23743 735 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DRD3P35462 400 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RPS24P62847 133 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CCDC15Q0P6D6 951 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ADAM9Q13443 819 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 LY6DQ14210 128 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MS4A13Q5J8X5 152 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 GRAMD1CQ8IYS0 662 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SLC25A45Q8N413 288 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 OR8D1Q8WZ84 308 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 KLHL11Q9NVR0 708 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 USP25Q9UHP3 1055 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SLCO3A1Q9UIG8 710 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TLR6Q9Y2C9 796 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 UNC79Q9P2D8 2635 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TDRD6O60522 2096 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DOCK9Q9BZ29 2069 aa12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 USP9YO00507 2555 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NYNRINQ9P2P1 1898 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SLC28A2O43868 658 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CSO75390 466 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms