RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 MAT2AP31153 395 aaKnown RBP9□□□□□ -0.97
BRIP1-204ENST00000579028 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
BRIP1-204ENST00000579028 SLC11A2P49281 568 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 VAMP7P51809 220 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 RPS24P62847 133 aaKnown RBP9□□□□□ -0.97
BRIP1-204ENST00000579028 ECT2LQ008S8 904 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 ENPEPQ07075 957 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 PPP3CAQ08209 521 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 ADIGQ0VDE8 80 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 NFATC3Q12968 1075 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 ISXQ2M1V0 245 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 KMT5BQ4FZB7 885 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 PITRM1Q5JRX3 1037 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 CEP135Q66GS9 1140 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 NUGGCQ68CJ6 796 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 NADSYN1Q6IA69 706 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 SHC4Q6S5L8 630 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 XKR5Q6UX68 686 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9□□□□□ -0.97
BRIP1-204ENST00000579028 TMC6Q7Z403 805 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 TTC39CQ8N584 583 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 TMEM145Q8NBT3 493 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 KIAA0895Q8NCT3 520 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 GRAMD1AQ96CP6 724 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 KLHDC7BQ96G42 594 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 APOLD1Q96LR9 279 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 SLC46A1Q96NT5 459 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 USP29Q9HBJ7 922 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 LRRC4Q9HBW1 653 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 KLHL11Q9NVR0 708 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 UCKL1Q9NWZ5 548 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 STIM2Q9P246 746 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 SLCO3A1Q9UIG8 710 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 SATB2Q9UPW6 733 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 PCDHGA8Q9Y5G5 932 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 HEMK1Q9Y5R4 338 aaPredicted RBP9□□□□□ -0.97
BRIP1-204ENST00000579028 U3KQA8 63 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 NAV2Q8IVL1 2488 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 ATMQ13315 3056 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 DOCK9Q9BZ29 2069 aa9□□□□□ -0.97
BRIP1-204ENST00000579028 A0A1W2PNU3 283 aaPredicted RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 TYW5A2RUC4 315 aaKnown RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CDRT15L2A8MXV6 281 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 FFAR2O15552 330 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 KLRC4O43908 158 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 RNGTTO60942 597 aaKnown RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 RTN2O75298 545 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 PIAS2O75928 621 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 MOCS3O95396 460 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 NTRK1P04629 796 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 ALPPL2P10696 532 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 SYT1P21579 422 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 RBMS1P29558 406 aaKnown RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 MLLT3P42568 568 aaPredicted RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 GCLMP48507 274 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 DUSP3P51452 185 aaPredicted RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 METAP1P53582 386 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 DAOAP59103 153 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 BST2Q10589 180 aaKnown RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 KCNMA1Q12791 1236 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 STK4Q13043 487 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CUL4AQ13619 759 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CUL4BQ13620 913 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CDH18Q13634 790 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 STK38Q15208 465 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 GOLGA7BQ2TAP0 167 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 ARL13BQ3SXY8 428 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 C8orf34Q49A92 452 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 SETMARQ53H47 684 aaPredicted RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 FSCBQ5H9T9 825 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 C3orf38Q5JPI3 329 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 COLEC12Q5KU26 742 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CCDC81Q6ZN84 652 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 MMS22LQ6ZRQ5 1243 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CARNMT1Q8N4J0 409 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 EXD3Q8N9H8 876 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CCDC150Q8NCX0 1101 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 KCTD13Q8WZ19 329 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 TATDN2Q93075 761 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 MYEOVQ96EZ4 313 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 PRR11Q96HE9 360 aaPredicted RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 IPO9Q96P70 1041 aaKnown RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 SPAG5Q96R06 1193 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 DDX50Q9BQ39 737 aaKnown RBP8.99□□□□□ -0.97
BRIP1-204ENST00000579028 TRIM4Q9C037 500 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 FAM117AQ9C073 453 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CNGB3Q9NQW8 809 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CISHQ9NSE2 258 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 EVA1BQ9NVM1 165 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 PPP4R2Q9NY27 417 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 NLGN3Q9NZ94 848 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 FRMD4BQ9Y2L6 1034 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 CFAP46Q8IYW2 2715 aa8.99□□□□□ -0.97
BRIP1-204ENST00000579028 SPTLC2O15270 562 aa8.98□□□□□ -0.97
BRIP1-204ENST00000579028 POLR2DO15514 142 aaKnown RBP8.98□□□□□ -0.97
BRIP1-204ENST00000579028 CUTAO60888 179 aa8.98□□□□□ -0.97
BRIP1-204ENST00000579028 LUC7L3O95232 432 aaKnown RBP8.98□□□□□ -0.97
BRIP1-204ENST00000579028 TRIM49P0CI25 452 aa8.98□□□□□ -0.97
BRIP1-204ENST00000579028 TRIM49CP0CI26 452 aa8.98□□□□□ -0.97
BRIP1-204ENST00000579028 THEGLP0DJG4 465 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms