RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SF3A2Q15428 464 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CSRP2Q16527 193 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 PTPRNQ16849 979 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MAP7D1Q3KQU3 841 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 PLEKHG6Q3KR16 790 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 TTC31Q49AM3 519 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 EFHC2Q5JST6 749 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 LYSMD4Q5XG99 296 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 SPECC1LQ69YQ0 1117 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 IL31Q6EBC2 164 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MON1BQ7L1V2 547 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 STRADAQ7RTN6 431 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 TMC6Q7Z403 805 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 KIAA0907Q7Z7F0 614 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 DSG4Q86SJ6 1040 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 DRC7Q8IY82 874 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 FRMD1Q8N878 549 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ATP11CQ8NB49 1132 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 JOSD2Q8TAC2 188 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 OLIG1Q8TAK6 271 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 SYN2Q92777 582 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 FOXJ1Q92949 421 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF653Q96CK0 615 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 TOE1Q96GM8 510 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 OMDQ99983 421 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CNPY3Q9BT09 278 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 C2orf49Q9BVC5 232 aaPredicted RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 TRIM5Q9C035 493 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ZYG11BQ9C0D3 744 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MKRN2Q9H000 416 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MIR1-1HGQ9H1L0 117 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 DEF6Q9H4E7 631 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MTG2Q9H4K7 406 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 MRPL47Q9HD33 250 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 PRSS16Q9NQE7 514 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ITM2CQ9NQX7 267 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 TMPRSS4Q9NRS4 437 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 TAS2R14Q9NYV8 317 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CNOT8Q9UFF9 292 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 SLCO3A1Q9UIG8 710 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CDV3Q9UKY7 258 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 HPCAL4Q9UM19 191 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 PCDHGA5Q9Y5G8 931 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.74□□□□□ -1.33
TRAF4-213ENST00000578917 SCINQ9Y6U3 715 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 ANAPC1Q9H1A4 1944 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 CEP250Q9BV73 2442 aa6.74□□□□□ -1.33
TRAF4-213ENST00000578917 IGHV1OR15-9A0A0B4J2B8 117 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 BCLAF3A2AJT9 711 aaKnown RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 TARSL2A2RTX5 802 aaKnown RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 FAM47DPA6NHR8 397 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 DRGXA6NNA5 263 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 MEI4A8MW99 385 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 DDX3XO00571 662 aaKnown RBP eCLIP6.73□□□□□ -1.333e-10■■□□□ 11.6
TRAF4-213ENST00000578917 ATMINO43313 823 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 CREB3O43889 395 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 PRPSAP2O60256 369 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 RNASEH2AO75792 299 aaKnown RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ENDOD1O94919 500 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 EPN2O95208 641 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 IL1BP01584 269 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF806P0C7X5 589 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 CHRM1P11229 460 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 GNSP15586 552 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 KCNA4P22459 653 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 EPHB2P29323 1055 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ETFBP38117 255 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 PRKCIP41743 596 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 DPP6P42658 865 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 PTGER3P43115 390 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 STK19P49842 368 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ZBTB16Q05516 673 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF33AQ06730 810 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 PTP4A2Q12974 167 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 CAMK2GQ13555 558 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ENPP2Q13822 863 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 TRIM14Q14142 442 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 DLG2Q15700 870 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 RSPO4Q2I0M5 234 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 HNRNPA1L2Q32P51 320 aaKnown RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ALFQ53S48 1182 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 SPDYCQ5MJ68 293 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 WDR45BQ5MNZ6 344 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 CCDC122Q5T0U0 273 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 OTUD1Q5VV17 481 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 PMS2CLQ68D20 193 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF776Q68DI1 518 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 TRNP1Q6NT89 227 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 RETSATQ6NUM9 610 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 SETD3Q86TU7 594 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 METTL3Q86U44 580 aaKnown RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 SYT12Q8IV01 421 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 MMAAQ8IVH4 418 aaKnown RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 RYBPQ8N488 228 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 KDM1BQ8NB78 822 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 OR8K1Q8NGG5 319 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 SNX19Q92543 992 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 CCDC114Q96M63 670 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms