RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 BNIPLQ7Z465 357 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 TMPRSS6Q8IU80 811 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 VSTM4Q8IW00 320 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 FRMD1Q8N878 549 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 TTC17Q96AE7 1141 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 SIPA1Q96FS4 1042 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 LMLNQ96KR4 655 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 RPL10LQ96L21 214 aaKnown RBP20.05■□□□□ 0.8
SS18-209ENST00000578595 ARRDC1-AS1Q9H2J1 176 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 DEF6Q9H4E7 631 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 ZNHIT6Q9NWK9 470 aaKnown RBP20.05■□□□□ 0.8
SS18-209ENST00000578595 USP34Q70CQ2 3546 aa20.05■□□□□ 0.8
SS18-209ENST00000578595 DMDP11532 3685 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 TCRBV5S1A1TA0A578 114 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 ZNF217O75362 1048 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 MYBL1P10243 752 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 OR1E1P30953 314 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 RPL6Q02878 288 aaKnown RBP20.04■□□□□ 0.8
SS18-209ENST00000578595 MAMLD1Q13495 774 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 ENPP2Q13822 863 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 CCDC6Q16204 474 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 ACCSLQ4AC99 568 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 C6orf118Q5T5N4 469 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 LPCAT2Q7L5N7 544 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 SLFN11Q7Z7L1 901 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 DEFB119Q8N690 84 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 OR2T3Q8NH03 318 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 C1orf74Q96LT6 269 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 ZYG11BQ9C0D3 744 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 MKRN2Q9H000 416 aaKnown RBP20.04■□□□□ 0.8
SS18-209ENST00000578595 DUSP15Q9H1R2 295 aaPredicted RBP20.04■□□□□ 0.8
SS18-209ENST00000578595 TMEM245Q9H330 911 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 MTG2Q9H4K7 406 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 CD93Q9NPY3 652 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 OR12D3Q9UGF7 316 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 SUN2Q9UH99 717 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 SPTBN4Q9H254 2564 aa20.04■□□□□ 0.8
SS18-209ENST00000578595 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 NDUFS2O75306 463 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 SRPRAP08240 638 aaKnown RBP20.03■□□□□ 0.8
SS18-209ENST00000578595 SULT2A1Q06520 285 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 MAP7D1Q3KQU3 841 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 PPP1R15BQ5SWA1 713 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 CCDC122Q5T0U0 273 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 PLEKHA7Q6IQ23 1121 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 DRC7Q8IY82 874 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 TMEFF1Q8IYR6 380 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 CENPIQ92674 756 aaPredicted RBP20.03■□□□□ 0.8
SS18-209ENST00000578595 CD248Q9HCU0 757 aa20.03■□□□□ 0.8
SS18-209ENST00000578595 MRPL47Q9HD33 250 aaKnown RBP20.03■□□□□ 0.8
SS18-209ENST00000578595 TTC34A8MYJ7 566 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 RNF8O76064 485 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 EPN2O95208 641 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 OGDHQ02218 1023 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 CAMK2GQ13555 558 aaPredicted RBP20.02■□□□□ 0.8
SS18-209ENST00000578595 C5orf22Q49AR2 442 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 PMS2CLQ68D20 193 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 CYP2U1Q7Z449 544 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 FAM124AQ86V42 546 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 ZNF354CQ86Y25 554 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 ZNF683Q8IZ20 524 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 OR8K1Q8NGG5 319 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 OR52K2Q8NGK3 314 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 GANCQ8TET4 914 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 TBC1D31Q96DN5 1066 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 ZC3H10Q96K80 434 aaKnown RBP20.02■□□□□ 0.8
SS18-209ENST00000578595 SPON2Q9BUD6 331 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 ARHGAP20Q9P2F6 1191 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 CHD5Q8TDI0 1954 aa20.02■□□□□ 0.8
SS18-209ENST00000578595 CEP250Q9BV73 2442 aa20.02■□□□□ 0.79
SS18-209ENST00000578595 IGLV3-10A0A075B6K4 115 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 A0A087X0T9 212 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 IGHV1OR15-9A0A0B4J2B8 117 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 DRGXA6NNA5 263 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 AP5Z1O43299 807 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 CREB3O43889 395 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 BNIP3LO60238 219 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 RNASEH1O60930 286 aaKnown RBP20.01■□□□□ 0.79
SS18-209ENST00000578595 SIN3BO75182 1162 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 DNTTP04053 509 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 FAM228BP0C875 321 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 EIF4A3P38919 411 aaKnown RBP20.01■□□□□ 0.79
SS18-209ENST00000578595 MPLP40238 635 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 COPAP53621 1224 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 KRT83P78385 493 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 TTC31Q49AM3 519 aaPredicted RBP20.01■□□□□ 0.79
SS18-209ENST00000578595 ALKBH5Q6P6C2 394 aaKnown RBP20.01■□□□□ 0.79
SS18-209ENST00000578595 SLC36A4Q6YBV0 504 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 SETD3Q86TU7 594 aaPredicted RBP20.01■□□□□ 0.79
SS18-209ENST00000578595 PYROXD2Q8N2H3 581 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 GPR161Q8N6U8 529 aaKnown RBP20.01■□□□□ 0.79
SS18-209ENST00000578595 NTAN1Q96AB6 310 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 LOXL4Q96JB6 756 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 MRGPRX3Q96LB0 322 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 FEM1AQ9BSK4 669 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 C2orf49Q9BVC5 232 aaPredicted RBP20.01■□□□□ 0.79
SS18-209ENST00000578595 ISCUQ9H1K1 167 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 FBRSQ9HAH7 460 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 PRSS16Q9NQE7 514 aa20.01■□□□□ 0.79
SS18-209ENST00000578595 PCSK1NQ9UHG2 260 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms