RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 CYB5D2Q8WUJ1 264 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 SLC2A13Q96QE2 648 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 CDC6Q99741 560 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
VAPA-204ENST00000577901 TMEM245Q9H330 911 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 TSPY26PQ9H489 355 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 C6orf106Q9H6K1 298 aaPredicted RBP16.56■□□□□ 0.24
VAPA-204ENST00000577901 SLC12A6Q9UHW9 1150 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 PCDHGB2Q9Y5G2 931 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 BAHCC1Q9P281 2608 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 FLRT2O43155 660 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 IRAK2O43187 625 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 ACSL4O60488 711 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 APOEP02649 317 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 SLC2A3P11169 496 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 CHRNB2P17787 502 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 ACSL1P33121 698 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 NOS2P35228 1153 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 SCNN1AP37088 669 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 RNASE9P60153 205 aaKnown RBP16.55■□□□□ 0.24
VAPA-204ENST00000577901 FMO1Q01740 532 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 DBX2Q6ZNG2 339 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 ZNF366Q8N895 744 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 WFIKKN2Q8TEU8 576 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 TMA16Q96EY4 203 aaKnown RBP16.55■□□□□ 0.24
VAPA-204ENST00000577901 SLC39A13Q96H72 371 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 FCRL2Q96LA5 508 aaPredicted RBP16.55■□□□□ 0.24
VAPA-204ENST00000577901 AGPAT1Q99943 283 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 EDEM3Q9BZQ6 932 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 FAM204AQ9H8W3 233 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 ABCB8Q9NUT2 735 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.55■□□□□ 0.24
VAPA-204ENST00000577901 TOR4AQ9NXH8 423 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 RRN3Q9NYV6 651 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.55■□□□□ 0.24
VAPA-204ENST00000577901 SLCO1B1Q9Y6L6 691 aa16.55■□□□□ 0.24
VAPA-204ENST00000577901 LOC400499M0QZD8 3231 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 CKAP5Q14008 2032 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 DAB1O75553 588 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 IGLV3-25P01717 112 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 TPM3P06753 285 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 ATXN1LP0C7T5 689 aaKnown RBP16.54■□□□□ 0.24
VAPA-204ENST00000577901 C7P10643 843 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 NSFP46459 744 aaKnown RBP16.54■□□□□ 0.24
VAPA-204ENST00000577901 SUZ12Q15022 739 aaKnown RBP16.54■□□□□ 0.24
VAPA-204ENST00000577901 TEAD4Q15561 434 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 PTPRNQ16849 979 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 KIF19Q2TAC6 998 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 FAM102AQ5T9C2 384 aaPredicted RBP16.54■□□□□ 0.24
VAPA-204ENST00000577901 CHST9Q7L1S5 443 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 TMPRSS7Q7RTY8 843 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 ADIPOR2Q86V24 386 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 XYLT1Q86Y38 959 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 AHI1Q8N157 1196 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 MDM1Q8TC05 714 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 RNF34Q969K3 372 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 TM9SF3Q9HD45 589 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 SEPT11Q9NVA2 429 aaKnown RBP16.54■□□□□ 0.24
VAPA-204ENST00000577901 TMEM51Q9NW97 253 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 DDIT4Q9NX09 232 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.54■□□□□ 0.24
VAPA-204ENST00000577901 STAP1Q9ULZ2 295 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 SNX11Q9Y5W9 270 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 ANKRD11Q6UB99 2663 aaPredicted RBP16.54■□□□□ 0.24
VAPA-204ENST00000577901 CELSR3Q9NYQ7 3312 aa16.54■□□□□ 0.24
VAPA-204ENST00000577901 GOLGA8CPA6NN73 597 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 SEMA4FO95754 770 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 UNGP13051 313 aaPredicted RBP16.53■□□□□ 0.24
VAPA-204ENST00000577901 MMP8P22894 467 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 CCR1P32246 355 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 RPS14P62263 151 aaKnown RBP16.53■□□□□ 0.24
VAPA-204ENST00000577901 MTA1Q13330 715 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 ZC3H12AQ5D1E8 599 aaKnown RBP16.53■□□□□ 0.24
VAPA-204ENST00000577901 FIGNQ5HY92 759 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 SFMBT2Q5VUG0 894 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 IRF2BP2Q7Z5L9 587 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 KIAA0907Q7Z7F0 614 aaPredicted RBP16.53■□□□□ 0.24
VAPA-204ENST00000577901 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.53■□□□□ 0.24
VAPA-204ENST00000577901 ATP6V0D2Q8N8Y2 350 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 BAP1Q92560 729 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 BTBD1Q9H0C5 482 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 FBRSQ9HAH7 460 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 OSGEPQ9NPF4 335 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 PRSS16Q9NQE7 514 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 GGA2Q9UJY4 613 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 BTBD3Q9Y2F9 522 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 ANKRD6Q9Y2G4 727 aa16.53■□□□□ 0.24
VAPA-204ENST00000577901 SYNJ2BP-COX16A0A087WUM0 186 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 FAM170AA1A519 330 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 TYW5A2RUC4 315 aaKnown RBP16.52■□□□□ 0.24
VAPA-204ENST00000577901 LRRC53A6NM62 1247 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 GOLGA8SH3BPF8 625 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 M0QYT0 321 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 DKK1O94907 266 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 FSBPO95073 299 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 MOCS2O96007 188 aaPredicted RBP16.52■□□□□ 0.24
VAPA-204ENST00000577901 DNTTP04053 509 aa16.52■□□□□ 0.24
VAPA-204ENST00000577901 ATP5BP06576 529 aaKnown RBP16.52■□□□□ 0.24
VAPA-204ENST00000577901 DLDP09622 509 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms