RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 SPATA2LQ8IUW3 424 aaPredicted RBP10.51□□□□□ -0.73
SS18-207ENST00000577636 FUKQ8N0W3 1084 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 RNF25Q96BH1 459 aaPredicted RBP10.51□□□□□ -0.73
SS18-207ENST00000577636 GTPBP2Q9BX10 602 aaKnown RBP10.51□□□□□ -0.73
SS18-207ENST00000577636 MAK16Q9BXY0 300 aaKnown RBP10.51□□□□□ -0.73
SS18-207ENST00000577636 OSBPL8Q9BZF1 889 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
SS18-207ENST00000577636 ZWILCHQ9H900 591 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 EPB41L5Q9HCM4 733 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 ZDHHC4Q9NPG8 344 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 CRTAC1Q9NQ79 661 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 FAM114A2Q9NRY5 505 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 TMEM74BQ9NUR3 256 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 TJP2Q9UDY2 1190 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 STAP1Q9ULZ2 295 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 NME7Q9Y5B8 376 aa10.51□□□□□ -0.73
SS18-207ENST00000577636 ATXN2Q99700 1313 aaKnown RBP10.51□□□□□ -0.73
SS18-207ENST00000577636 C2CD4BA6NLJ0 364 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 CAPN9O14815 690 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 PAPSS1O43252 624 aaPredicted RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 RAD51CO43502 376 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 HCRTO43612 131 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 LRCH4O75427 683 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 GRAP2O75791 330 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 KLF8O95600 359 aaPredicted RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 NFATC1O95644 943 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 ECEL1O95672 775 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 RALAP11233 206 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 ENGP17813 658 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 PTPN7P35236 360 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 RDXP35241 583 aaKnown RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 OPRD1P41143 372 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 PTGER3P43115 390 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 PTPN9P43378 593 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 SLC6A11P48066 632 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 RPL34P49207 117 aaKnown RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 TKTL1P51854 596 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 YWHAZP63104 245 aaKnown RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 SLC7A5Q01650 507 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 OGDHQ02218 1023 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 ADIGQ0VDE8 80 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 HLTFQ14527 1009 aaKnown RBP eCLIP10.5□□□□□ -0.73
SS18-207ENST00000577636 KRT81Q14533 505 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 CRY1Q16526 586 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 CCDC142Q17RM4 750 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 BOLA3Q53S33 107 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 EMC10Q5UCC4 262 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 SCYL2Q6P3W7 929 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 EMBQ6PCB8 327 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 CCDC137Q6PK04 289 aaKnown RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 C19orf48Q6RUI8 117 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 TMEM92Q6UXU6 159 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 CLEC20AQ6ZU45 233 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 SYDE1Q6ZW31 735 aaPredicted RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 RASSF3Q86WH2 238 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 CPNE8Q86YQ8 564 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 SFTPA1Q8IWL2 248 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 HDDC3Q8N4P3 179 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 CHCHD4Q8N4Q1 142 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 EIF1ADQ8N9N8 165 aaKnown RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 TXNDC5Q8NBS9 432 aaKnown RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 HMGB4Q8WW32 186 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 IFT81Q8WYA0 676 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 MYLPFQ96A32 169 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 FAM149B1Q96BN6 582 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 PCED1BQ96HM7 432 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 SPACA7Q96KW9 195 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 TBCBQ99426 244 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 B3GNT5Q9BYG0 378 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 DMAP1Q9NPF5 467 aaPredicted RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.5□□□□□ -0.73
SS18-207ENST00000577636 AMACRQ9UHK6 382 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 MMP17Q9ULZ9 603 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 FRYQ5TBA9 3013 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 EML5Q05BV3 1969 aa10.5□□□□□ -0.73
SS18-207ENST00000577636 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
SS18-207ENST00000577636 THADAQ6YHU6 1953 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 LEFTY2O00292 366 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 TULP2O00295 520 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 CLDN5O00501 218 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 DAB1O75553 588 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 TRUB2O95900 331 aaKnown RBP10.49□□□□□ -0.73
SS18-207ENST00000577636 ATXN8OSP0DMR3 200 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 HNRNPLP14866 589 aaKnown RBP eCLIP10.49□□□□□ -0.731e-9■■■■■ 30.1
SS18-207ENST00000577636 MIPP30301 263 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 FLT3P36888 993 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 COILP38432 576 aaPredicted RBP10.49□□□□□ -0.73
SS18-207ENST00000577636 USP4Q13107 963 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 PDK2Q15119 407 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 PPP1R7Q15435 360 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 CYP1B1Q16678 543 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 CDO1Q16878 200 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 AADACL2Q6P093 401 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 SPOCD1Q6ZMY3 1216 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 SYT12Q8IV01 421 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 ALLCQ8N6M5 410 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 PRELID2Q8N945 189 aa10.49□□□□□ -0.73
SS18-207ENST00000577636 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms