RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 VPS28Q9UK41 221 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 HCN2Q9UL51 889 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 USP18Q9UMW8 372 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 STON1Q9Y6Q2 735 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CHD5Q8TDI0 1954 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 GVINP1Q7Z2Y8 2422 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 GON4LQ3T8J9 2241 aa13.07□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ILVBLA1L0T0 632 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FGF10O15520 208 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CREB3O43889 395 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SYNCRIPO60506 623 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 LCA5LO95447 670 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SRPRAP08240 638 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 OR1E1P30953 314 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 HOXC13P31276 330 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MAN1A1P33908 653 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CNR2P34972 360 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NNMTP40261 264 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 WASP42768 502 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MAGEA1P43355 309 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TPI1P60174 286 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 KRT83P78385 493 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ECT2LQ008S8 904 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ENPP2Q13822 863 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 HADHQ16836 314 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 BOLA3Q53S33 107 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 WDR5BQ86VZ2 330 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 DCAF4L2Q8NA75 395 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ZBTB44Q8NCP5 570 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CYB5D2Q8WUJ1 264 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SORCS1Q8WY21 1168 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ACOX2Q99424 681 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 BAG1Q99933 345 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SNRNP25Q9BV90 132 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 C2orf49Q9BVC5 232 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SEMA4AQ9H3S1 761 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 DHX35Q9H5Z1 703 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FBRSQ9HAH7 460 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ZDHHC4Q9NPG8 344 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TMEM248Q9NWD8 314 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 BCCIPQ9P287 314 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PCSK1NQ9UHG2 260 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RAPGEFL1Q9UHV5 662 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SLC25A13Q9UJS0 675 aa13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 INTS6Q9UL03 887 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 EPN1Q9Y6I3 576 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MUC22E2RYF6 1773 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TCRBV21S2A2A0A5A6 115 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ANTXRLA6NF34 631 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SOWAHDA6NJG2 315 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 EEF2KO00418 725 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 AXIN1O15169 862 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MTA2O94776 668 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PROSCO94903 275 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NDUFA10O95299 355 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 EPHX1P07099 455 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MZF1P28698 734 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 EPHB2P29323 1055 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NBL1P41271 181 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ARHGAP25P42331 645 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 IL12RB1P42701 662 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FNTBP49356 437 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SEMA3BQ13214 749 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TCEAL1Q15170 157 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 HEATR6Q6AI08 1181 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TMEM92Q6UXU6 159 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RASSF3Q86WH2 238 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TXLNBQ8N3L3 684 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ARFGAP1Q8N6T3 406 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RTL3Q8N8U3 475 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SLC35G2Q8TBE7 412 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 TEKT4Q8WW24 435 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PEBP4Q96S96 227 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FEM1AQ9BSK4 669 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 GRPEL1Q9HAV7 217 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ZNF212Q9UDV6 495 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SUN2Q9UH99 717 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NUP205Q92621 2012 aa13.05□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FAM72CH0Y354 149 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RAMP2O60895 175 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PRKCHP24723 683 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ARL4AP40617 200 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SSR1P43307 286 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NHLH1Q02575 133 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 BYSLQ13895 437 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 DPYSL2Q16555 572 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PTPRNQ16849 979 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FAM72AQ5TYM5 149 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FAM72DQ6L9T8 149 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 C11orf74Q86VG3 221 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FAM72BQ86X60 149 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 APCDD1Q8J025 514 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PYROXD2Q8N2H3 581 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 HMGB4Q8WW32 186 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 BTBD6Q96KE9 485 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms