RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NR3C1P04150 777 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 NTRK1P04629 796 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 GP1BAP07359 652 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 VAV1P15498 845 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 PDCP20941 246 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 NUDT1P36639 197 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 DUSP3P51452 185 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 VAMP7P51809 220 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 RAD23BP54727 409 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 ELAVL3Q14576 367 aaKnown RBP16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 STK38Q15208 465 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 GOLGA7BQ2TAP0 167 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 SETMARQ53H47 684 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 IFI44Q8TCB0 444 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 PRICKLE1Q96MT3 831 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 ARHGAP9Q9BRR9 750 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 IRX2Q9BZI1 471 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 KDM4CQ9H3R0 1056 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 CISHQ9NSE2 258 aa16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 MORC2Q9Y6X9 1032 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-211ENST00000575783 TP53BP1Q12888 1972 aaPredicted RBP16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 PVALEFA0A1B0GWK0 134 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 TERTO14746 1132 aaKnown RBP16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 SLC31A1O15431 190 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 PLRG1O43660 514 aaKnown RBP16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 GIMD1P0DJR0 217 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 TGM2P21980 687 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 AFMP43652 599 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 STK19P49842 368 aaPredicted RBP16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 SKOR1P84550 965 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 CLN3Q13286 438 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 CUL4BQ13620 913 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 ARL13BQ3SXY8 428 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 ZNF542PQ5EBM4 170 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 NUGGCQ68CJ6 796 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 ARHGAP17Q68EM7 881 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 NADSYN1Q6IA69 706 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 IGF2-ASQ6U949 168 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 ZNF574Q6ZN55 896 aaPredicted RBP16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 APCDD1Q8J025 514 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 SIX6OS1Q8N1H7 587 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 KLK6Q92876 244 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 CALN1Q9BXU9 219 aa16.82■□□□□ 0.28
CTDNEP1-211ENST00000575783 FLNCQ14315 2725 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 ITIH6Q6UXX5 1313 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 LY6G6EA0A0G2JKS1 128 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 CPED1A4D0V7 1026 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 PMS2P1A4D2B8 440 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 XPO1O14980 1071 aaKnown RBP16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 POLR2DO15514 142 aaKnown RBP16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 PIAS2O75928 621 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 NEBLO76041 1014 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 LCP1P13796 627 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 PRLRP16471 622 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 NNMTP40261 264 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 TBX4P57082 545 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 PPP3CAQ08209 521 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 CNTN1Q12860 1018 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 STK4Q13043 487 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 LINC00303Q3SY05 128 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 TRIM69Q86WT6 500 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 UBA3Q8TBC4 463 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 ARRDC3Q96B67 414 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 CCNL2Q96S94 520 aaPredicted RBP16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 DDX50Q9BQ39 737 aaKnown RBP16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 EVA1BQ9NVM1 165 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 NLGN3Q9NZ94 848 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 SARDHQ9UL12 918 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 U3KQA8 63 aa16.81■□□□□ 0.28
CTDNEP1-211ENST00000575783 NEMP2A6NFY4 417 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 K7ESM1 405 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 SPTLC2O15270 562 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 SLC7A4O43246 635 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 EFSO43281 561 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 TNFSF15O95150 251 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 IGLV3-27P01718 113 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 PDIA4P13667 645 aaKnown RBP16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 CDKN3Q16667 212 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 GRAMD1CQ8IYS0 662 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 LINC00301Q8NCQ3 95 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 TMEM174Q8WUU8 243 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 PRR11Q96HE9 360 aaPredicted RBP16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 SPAG5Q96R06 1193 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 NUCKS1Q9H1E3 243 aaKnown RBP16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 KCTD10Q9H3F6 313 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 FZD3Q9NPG1 666 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 HESX1Q9UBX0 185 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 TSPAN16Q9UKR8 245 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 ENTPD2Q9Y5L3 495 aa16.8■□□□□ 0.28
CTDNEP1-211ENST00000575783 UNC79Q9P2D8 2635 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 PIK3R2O00459 728 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 PDXKO00764 312 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 SCAMP1O15126 338 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 SUV39H1O43463 412 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 RNGTTO60942 597 aaKnown RBP16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 LUC7L3O95232 432 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms